Populus trichocarpa (black cottonwood): 7456214
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Entry
7456214 CDS
T01077
Name
(RefSeq) protein DSS1 HOMOLOG ON CHROMOSOME V
KO
K10881
26 proteasome complex subunit DSS1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
pop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7456214
09124 Replication and repair
03440 Homologous recombination
7456214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7456214
04131 Membrane trafficking [BR:
pop04131
]
7456214
03051 Proteasome [BR:
pop03051
]
7456214
03400 DNA repair and recombination proteins [BR:
pop03400
]
7456214
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
7456214
Membrane trafficking [BR:
pop04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
7456214
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
7456214
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
7456214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSS1_SEM1
Motif
Other DBs
NCBI-GeneID:
7456214
NCBI-ProteinID:
XP_002300090
UniProt:
A9PGZ1
LinkDB
All DBs
Position
1:34291359..34292531
Genome browser
AA seq
72 aa
AA seq
DB search
MATEPKPATEDVKIDLFEDDDEFEEFEINEEWKEKEEGKEVTQQWEDDWDDDDVNDDFSL
QLKKELENTPKN
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgaaccgaaacctgcaactgaggatgtgaagattgacttgttcgaggatgat
gatgaatttgaagaatttgaaatcaatgaagagtggaaagagaaggaggaagggaaagag
gtgacacagcagtgggaggatgattgggatgatgatgatgtcaatgatgacttctcactg
cagctgaaaaaggaattggagaacacaccaaagaactga
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