Populus trichocarpa (black cottonwood): 7456348
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Entry
7456348 CDS
T01077
Name
(RefSeq) protein SHI RELATED SEQUENCE 1
KO
K27807
short internodes/stylish family transcription factor
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7456348
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
7456348
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GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
7456348
NCBI-ProteinID:
XP_002313022
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Position
9:complement(10182041..10184028)
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AA seq
205 aa
AA seq
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MMMMRPAGCLGGSRCQDCGNQAKKDCFYMRCRTCCKSKGFHCQTHVKSTWVPAYRRRQRA
QDLSPVQQHQLQGHNPKRLRENPSSGLEIENFPAEVNSTATFRCFRVSSIDEAVDQVAYQ
TRVNIGGHVFKGILYDQGPENRYDFGESSCRQLQGPNLTNAGALTPATTTLASTSGAAEC
LARPSFPFPLNAFMSDKQLFLHPKS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgagaccagctggatgtttggggggctcaaggtgtcaagactgtggaaac
caagctaagaaagactgtttttacatgagatgcagaacttgttgtaagagtaaaggtttt
cattgtcaaacacacgtcaagagcacttgggttcccgcttatagacggcgacagagagct
caagatctttctcctgttcagcaacaccagcttcaaggacacaaccctaaaaggctcaga
gaaaatccctcctcaggtttagaaatcgagaattttcctgctgaagtgaactctacagcc
acatttcgttgctttcgagtgagctccattgatgaagcggttgatcaagttgcatatcaa
acaagggtgaatataggaggtcatgtttttaagggtattctctacgatcaaggccctgaa
aatcgttatgactttggtgaaagctcttgcagacaacttcaagggcctaatctcacaaat
gcaggtgccctaactcctgctactaccactttagcttcaacttctggtgctgcagaatgt
cttgctcgtccttcatttccttttccccttaatgcttttatgtccgataagcagcttttc
ctacacccaaaatcttag
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