Populus trichocarpa (black cottonwood): 7456367
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Entry
7456367 CDS
T01077
Name
(RefSeq) adoMet-dependent rRNA methyltransferase spb1
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7456367
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
7456367
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
7456367
NCBI-ProteinID:
XP_002313039
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All DBs
Position
9:complement(9943000..9948484)
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AA seq
840 aa
AA seq
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MGKVKGKHRLDKFYKLAKEHGYRSRASWKLIQLDTKFKFLQSSRAVLDLCAAPGGWMQVA
VQRVPVRSLVLGIDLVKIAPLRGAVSIEQDITKPECRAKIKKIMGEHGVRAFDLVLHDGS
PNIGGAWSQEAMAQNSLVIDSVRLATQFLAPKGTFVTKVFRSQDYSSVIYCLNQLFEKVE
VDKPAASRSASAEIFVLGLRYKAPAKIDPRLLDIKHLFQGSDEPQRKVVDVLRGTKQKRH
RDGYEDGESIVRKVSSAADFIWSDSPLEILGSVTSIAFDDEVSLPLRDHDLTTEEVKHLC
DDLRVLGKQDFKHLLKWRMQIRKALSSSQKASPSIGKGGEDEKEEDEDDRLLNEMEDLTN
AMERKKKREKKLLAKRRAKDKVRKATGGMQIDATADGYTDLELFSLSSIKGKKDLVAVDA
ADYDHENGGLRDGENEETDEENQEHSPSDVDSDEERRRFDEQMEEILDQAYERFVTKREG
STKQRKRAKQAYAEQLLEGDGDNDIVHSDYDSDKETGDHEANPLMVPFNDGEVPTEEEIT
RKWFDQDIFAKAAEDGDLETAEARNLEKYESEDEMLVDGQEKEIATPKKSAKNAAGSDRT
QPPSSTAENDFEIVPAPATDSSDDSSSDESEDDDVDSKAEILACAKKMLRKKRREQMLDD
SYNKYMFDDEGLPGWFVEEEKRHCQPIKPVTKEEIAAMRAQFKEINARPAKKVAEAKARK
KRVAARKLEKVRKKANDISKQTEISDHSKGRLIEQLYKKAAPKRPKKEYVVAKKGVTVKV
GKGKVLVDRRMKKDARGMGKPGKGGLKKGKNAKGQRGKGPAKTSAKGNKGKKGKKMGMHE
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagtaaagggaaagcatcgtttggataaattttacaaactagccaaagaacac
ggctatcgatcgcgtgcgtcatggaaactaattcaactagacaccaagttcaagttcctc
caatcctcacgcgccgtgcttgacctttgtgctgcacccggcgggtggatgcaggtggca
gtgcagcgcgtgcctgtaagaagtcttgttttaggcattgatttagttaaaatagcgcct
ttacgaggggctgtctcgatagagcaggatataaccaagcctgagtgtagagctaagatt
aagaaaatcatgggagaacatggagttagagcttttgatttggttttacatgatgggtca
cctaatattggtggtgcttggtctcaagaagctatggctcaaaattctctggttatcgat
tctgttagattggctactcagttcttggctcctaaaggaacttttgttactaaagttttc
aggtcccaagattatagttctgtcatctattgtcttaatcagttatttgagaaggtcgag
gtggataaaccagcagcaagtcgttcagcatctgctgaaatatttgttttgggtttaagg
tacaaggcccctgctaagattgatcctcgtcttcttgacataaagcatttatttcaggga
tctgacgaaccccaacggaaggtggtggatgtccttagaggaacaaagcagaagcggcat
cgtgatgggtatgaagatggagagtccattgtcagaaaagtttcctcagcagctgatttc
atttggtctgacagccctcttgagatccttggttccgttacttcaatagcctttgatgat
gaggtttctttacccttgcgtgatcatgatttaaccacagaagaggttaaacatctttgt
gatgatctgcgtgttttgggaaaacaagacttcaagcatctattgaagtggcggatgcaa
ataagaaaggccctgtcttcgtctcagaaagctagtccttctattggaaaaggtggtgaa
gatgaaaaagaggaggatgaagatgataggttgctcaatgaaatggaggacctgacaaat
gctatggagcggaagaagaaacgagaaaagaaacttcttgcaaaaagacgagccaaggat
aaagtacggaaggcaaccggtggaatgcaaatcgatgcaacggcagatggttacactgat
cttgaattgttctctctttcttccatcaagggaaagaaagatttagtagctgttgatgct
gctgactatgatcatgagaatggtggcttaagggatggtgaaaatgaagaaactgatgag
gaaaaccaggagcattcacccagtgatgtagattctgatgaggaacgcagaagatttgat
gaacaaatggaagagatccttgatcaggcttatgaaaggtttgtgaccaaaagggaagga
agtaccaagcagcggaaacgtgcaaagcaagcctatgctgaacaacttttggagggtgat
ggtgacaatgatattgttcattcagattatgattcagataaagaaacgggtgatcatgaa
gcaaatcctctgatggtaccattcaatgatggggaagtgccaactgaagaagagattaca
aggaagtggtttgatcaggatatctttgccaaagctgcagaggatggagacttggaaact
gcagaggccagaaacttggagaagtatgaaagtgaagatgaaatgctggtagatggacag
gagaaagaaattgcgactccaaaaaagtctgcaaagaatgctgcagggtctgatcgtact
caacccccatcttctacggcagaaaatgattttgagatagtccctgctccagctacagat
tctagtgatgattcatcatcagatgaatctgaggatgatgatgttgactcaaaggctgag
atattggcttgtgctaagaagatgcttagaaaaaagcgaagggagcagatgcttgatgat
tcctacaacaagtatatgtttgatgatgagggcctgcctggctggtttgtggaggaagag
aagagacactgccagccaattaagccggttaccaaagaggagattgctgctatgcgagca
caattcaaagaaataaatgctcggcctgctaagaaagtggctgaagccaaggctcgaaag
aagagggtagctgcgaggaagcttgagaaggtgcgcaagaaggcaaatgatatatcaaag
cagacggagatctctgatcactcaaagggcaggttaattgagcaactatacaaaaaggct
gcaccaaaaaggcctaagaaggaatatgtggttgcaaagaaaggagttacagtcaaggtt
ggcaaggggaaagtccttgttgatcggcggatgaaaaaggatgcgcgtggtatgggaaag
ccaggaaaaggtggtttgaagaagggtaagaatgcaaagggccagagaggtaaagggcct
gcaaagacttcagctaagggaaataagggaaagaaaggaaaaaagatgggcatgcatgaa
taa
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