Populus trichocarpa (black cottonwood): 7456375
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Entry
7456375 CDS
T01077
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
7456375
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
7456375
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7456375
Enzymes [BR:
pop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
7456375
Amino acid related enzymes [BR:
pop01007
]
Aminoacyl-tRNA synthetase
Class II (U)
7456375
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
7456375
Prokaryotic type
7456375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
PheRS_DBD1
tRNA-synt_2
tRNA_synthFbeta
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
7456375
NCBI-ProteinID:
XP_024464830
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All DBs
Position
9:9803103..9810339
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AA seq
492 aa
AA seq
DB search
MAEEAILGYLQNHEGISDSGQFATDHGLDHSDVVNVIKSLHGFRYVDAQDIKRETDVLTE
EGEKYAEQGSPEVQLFLAVPAEGSILKEELQKLVDPAVFKIGCSQAAKNKWVQMGNQISR
KVQHVEDRIKDLLLQIRDGQEIDTGDKKSLKARKLIAVQTWKGYSVRKGPDYAPIRRRTA
TDLTREYLQGGDWRNIEFKEYNFSAKGPPPEGGHLHPLNKVKERLKDIFRLMNFEEMPTN
RYVESSFWNFDALFQPQQHPARDSHDTFFLKAPETTKQLPEDYVELVKRVHESGGYGSRG
YGYDWKREEANKNLLRTHTTAISSRMLYAVAQLAKQQSFTPKRYFSIDRVFRNEAVDRTH
LAEFHQIEGLVCDRGLTLGHLIGVLQDFFSRLGMDKLKFKPAYNPYTEPSMEIFSYHEGL
GKWVEIGNSGMFRPEMLRPMGFSEDVNVIAWGLSLERPTMILYGIDNIRELFGHKVDLAL
VKRNPLCLIGIQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaagcgattttaggttacttacagaaccacgaaggaatctccgattccggc
cagttcgctactgatcatggactcgaccacagcgacgtcgttaatgtcatcaaaagcctc
catggcttccgctacgtcgatgctcaggatattaagagagagacagatgtgcttaccgaa
gagggtgaaaaatatgctgaacaaggatcacctgaagttcagcttttcttggctgtacca
gcggagggtagcatattgaaagaagaattgcagaaactggtggatcctgcagttttcaaa
ataggatgttctcaggctgcaaaaaataaatgggttcaaatgggaaatcaaatatctagg
aaggttcaacatgtggaagacagaataaaggatcttcttttacagatacgagatggacag
gaaattgacacaggtgataagaagtctctcaaagctagaaagcttattgctgtgcaaacc
tggaagggctactcggtgagaaaaggtcctgattatgctccaataagaaggagaactgca
actgatttgactcgtgaatatctacaggggggtgattggaggaatatagagttcaaagag
tataacttcagtgccaaaggtccaccacctgaaggtggccatcttcacccactcaacaag
gtgaaagagcgactgaaggacatttttcgtctaatgaactttgaggaaatgcctacaaat
agatatgtagagagcagcttctggaattttgatgcactgttccagccacaacaacatcct
gcccgtgattcgcatgataccttctttcttaaagctcctgaaacaacaaagcaactgcct
gaagattatgttgagctggtgaaacgtgtgcatgagtctggtggctatgggtcaagggga
tatggatatgattggaaaagagaagaagcaaacaaaaaccttttgcgaactcatacgact
gcaatttcttctcggatgctttatgcggtagcacagcttgcaaaacagcaatcgtttacc
cccaaaaggtacttctccatagatcgagttttcagaaatgaagcagtagatcgaactcat
ctagcagaattccaccagatagaaggtctggtgtgtgatcgagggcttactctaggtcac
ttgattggagtgttgcaggacttcttttcacgtttaggcatggacaagctgaaattcaag
cctgcatataatccatatactgagcctagcatggagattttcagttatcacgaaggcctt
gggaaatgggtggagattggtaattctggcatgtttagacctgaaatgttgcgtcctatg
ggattctcagaagatgttaatgttattgcatggggcctttcgcttgaaagaccaaccatg
atattatacgggatcgataatatcagggagctttttggacacaaggtggatcttgccctc
gtcaagagaaaccctctctgccttattgggattcagtag
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