Populus trichocarpa (black cottonwood): 7456399
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Entry
7456399 CDS
T01077
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7456399
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
7456399
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
7456399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
Rcat_RNF216
IBR_1
zf-RING_UBOX
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
7456399
NCBI-ProteinID:
XP_024464497
LinkDB
All DBs
Position
9:complement(9514662..9520191)
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AA seq
591 aa
AA seq
DB search
MEGEEDYGFSEEEDYYYADDGDSHDGLADNDDSALQWAPPKGSTTKVITKESLLAAQRED
LRRVMDLLSLKEHHARTLLIHYRWDVEKLLAVLVEKGKSCLFTEAGVTVVENVDDEVPPS
SSSTITCDICIEDATADNATRMECGHCFCNNCWTEHFIIKINEGQSRRIQCMAHRCSAIC
DEAIVRNLVSRRHPNLAEKFDRFLLESYIEDNKMVKWCPSIPHCGKAIRVEEDEFCEVEC
SCGLQFCFSCLSEAHSPCSCLMWERWSKKCHDESETVNWITVHTKPCPKCYKPVEKNGGC
NLVSCICGQSFCWVCGGATGRDHTWSRIAGHSCGRYKEDREKQTERAKRDLYRYMHYHNR
FKAHTDSFKLESKLKESILDKVSVAEERELRLKDFSWVTNGLNRLFRSRRVLSYSYPFAF
YMFGEEFFKDEMTDEEREIKKNLFEDQQQQLESNVEKLSMFLEEPFQQFSQDKVMDIRMR
VINLSVTIDTLCQKMYECIESDLLGSLHLGTHHIAPYKSKGIERASELSSCWNTKLGSTD
EYLPSGGTSEHDRPSGSGSSDDSGCSYRKRAKKEGGGFFDLNLPAEIVDRN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgaggaggattatggatttagtgaagaggaggactactattacgccgatgat
ggtgactcgcatgacggccttgccgacaatgacgattctgctttacagtgggctccacct
aagggctcaactactaaggtgatcactaaagagtccctcttggctgcacagagggaagat
ttgcggagagtcatggatttgctatcactaaaagaacaccatgcacggactttattgatc
cattatcgatgggatgttgaaaagctacttgcagtgcttgtggagaaagggaaatcgtgt
ttgtttactgaagcaggtgttactgtggttgaaaatgttgatgatgaagtgccaccgagt
tcatcttctacaataacttgtgatatatgcatagaggatgcaactgctgataacgccaca
agaatggaatgtggccattgtttctgcaacaattgctggacagaacacttcattataaaa
ataaatgagggccagagcaggcgcatccagtgcatggcacacagatgtagtgcaatttgt
gatgaagctattgtcaggaatttagtaagtagaaggcatcctaatttggcagagaaattt
gatcgctttcttcttgagtcgtatattgaggacaataaaatggtcaaatggtgtccgagc
attcctcactgcgggaaagctatacgagttgaggaggatgaattttgcgaggtagaatgt
tcatgtggtctgcagttttgtttcagttgcttatcagaagcacactcgccttgttcatgc
ttaatgtgggagcgctggagcaagaagtgccacgatgaatctgaaactgttaactggatc
acggttcatacaaagccttgtccaaagtgctacaaacctgtcgagaaaaatggtggctgc
aaccttgttagctgcatctgtggacagtcattttgttgggtgtgtggtggagctactggt
agagaccacacttggtcaagaatagcaggtcacagttgtggtcgctacaaagaagaccga
gagaaacaaaccgaaagggcaaaacgggatctctatcgatatatgcattatcataaccgc
ttcaaggctcatacagattcctttaagcttgaaagtaaactgaaggaatcaatcctagac
aaggtgtccgttgcagaagagagggaattgagactcaaagatttcagctgggtaactaat
ggactcaacagacttttcagatcaagacgggttctttcttattcgtacccgtttgcattt
tacatgtttggtgaagagttttttaaggacgagatgacagacgaggaaagggaaataaaa
aagaatctatttgaggatcagcaacagcagcttgagtcgaatgttgagaaactctccatg
tttctggaggagccctttcagcagttcagtcaggataaagttatggatataaggatgcgc
gtcatcaatctgtctgtgaccattgataccctctgtcagaaaatgtatgaatgcattgag
agcgatttgttgggttctcttcatctaggcacccatcatatagctccttacaagtcgaag
ggcattgaaagggcatcggaactttcctcttgttggaacaccaaacttggttctacagat
gaatacctaccaagtggtgggacatcagaacatgacagaccttctggctctgggagttca
gatgatagtggatgctcttatcggaagcgtgctaaaaaggagggtggtgggttttttgat
ctgaacttgccagcagagattgtagacaggaactga
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