Populus trichocarpa (black cottonwood): 7456667
Help
Entry
7456667 CDS
T01077
Name
(RefSeq) ribonuclease TUDOR 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
7456667
NCBI-ProteinID:
XP_002322312
UniProt:
B9ICC8
LinkDB
All DBs
Position
15:complement(12688519..12695561)
Genome browser
AA seq
984 aa
AA seq
DB search
MATSTAGATGWYRGKVKAVPSGDSLVIMAMTSSKPGPPPEKTITLSSLIAPRLARRGGVD
EPFAWNSREYLRKLCIGKEVTFKVDYAVPSIGREFGSVFLGEKNVALLVVSEGWAKVREQ
GQQKGEASPFLAELLRLEEQAKQQGLGRWSKAPGASEASIRNLPPSAIGDSSNFDAMGLL
AANKGTPMECIVEQVRDGSTIRVYLLPDFQFVQVFVAGIQAPSMGKRAAIETVGETVTTS
NGTNGDTSETRAPLTSAQRLAASAAPPEVAPDPFGMEAKYFTELRTLNRDVRIVLEGVDK
FSNLIGSVYYPDGESAKDLALELVENGLAKFVEWSANMMEEDAKRQLKTAELQAKKSRLR
FWTNYVPPATNSKAIHDQNFTGKVVEVVSGDCVIVADDSVPYGSPLAERRVNLSSIRCPK
MGNPRRDEKPAPYAREAKEFLRTRLIGRQVNVRMEYSRKMTDGPTAAPVPGDARVMDFGS
IFLLSPTKGDEASTAPSTAAGQQPGINVAELVVSRGFGTVIRHRDFEERSNFYDALLAAE
SRAIAGKKGIHSAKDPPVMHITDLTTSSSKKAKDFLPFLHRSRRISAVVEYVLSGHRFKL
LIPKETCSIAFSFSGVRCPGRDEPYSEEAIALMRRKIMQRDVEIEVETVDRTGTFLGSLW
ESRTNMAVTLLEAGLARFQTSFGTDRIPDAHLLEQAEQSAKRQKLKIWENYVEGEEINSG
PVVESKQKEVLKVVVTEVLDGGRFYVQIVEDKKIASIQQQLASLNLQEAPVIGAFNPKKG
DIVLAQFSADNSWNRAMIVNAPRGGVESPRDKFEVFYIDYGNQEEVPYSHIRPLDPSVSA
APGLAQLCSLAYIKVPSLEDDCGPEAAQYFSDNTLNSSKELRAKVEERDASGGKVKGQGT
GPVVVVTLVAVDSEISLNAALVQEGLARIEKMRKWDSMERKVALENLEKFQDEARADRRG
LWVHGDIESDDEDVLPVKKTGGRR
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcaacagctggagctacaggatggtacagaggaaaagtgaaagcagttcct
tcaggggatagcttggtgataatggctatgactagcagtaagcctggccctccaccggaa
aagactatcactttgtcctctctcattgccccgagattggctcgcagaggtggtgtagat
gagccatttgcctggaacagcagagagtatttgaggaagctctgcataggaaaggaagtg
actttcaaggtagattacgctgttccatccattggcagagaattcggctctgtgttcctt
ggtgaaaaaaatgttgcattgctggttgtttctgaaggctgggcaaaggttagggagcag
ggtcagcaaaaaggtgaagctagtccttttcttgctgagctcctacgccttgaggagcaa
gcaaaacagcagggtctgggcagatggagtaaggcaccaggagcctcagaggcatcgatc
agaaatctacccccctctgccattggtgattcgagtaattttgatgctatgggtctgcta
gctgcaaacaagggaacacccatggaatgcattgtggagcaggttcgtgatggcagtacc
atccgtgtctacttgcttccagactttcaatttgttcaagtgtttgttgctggaatacag
gccccatcaatgggtaaaagagctgcaatagaaactgttggtgaaactgtaacaacctct
aatggaacaaatggtgacacatctgaaactcgtgcccctttaacatctgcacagagactt
gcagcctcagcagctcctccagaagttgctcctgatccatttgggatggaagccaaatat
tttacagagctacgtactttgaacagggatgtccgcattgttctggaaggtgttgacaag
ttcagcaatttgattggatcagtatactatcctgatggggaatctgcaaaggacttggca
ctagagcttgttgaaaatggtttggcaaaatttgttgaatggagtgcaaacatgatggaa
gaagatgctaaacggcagctgaagactgcagaactgcaagccaaaaaaagtcgattgagg
ttctggactaattatgtaccccctgctacaaattcaaaagcaatccatgatcagaatttt
actggaaaggtagtggaggttgtaagtggtgattgtgtcattgtggcggacgattctgtg
ccttatggcagtccattggcagagagacgagtcaatctttcaagcattaggtgtccaaaa
atgggtaatcctcgtagagatgaaaaacctgctccttatgcccgggaagctaaggagttt
ttgaggacacgccttattggacgacaagtgaatgtgagaatggaatattctaggaagatg
acagatggacccacagctgcccctgttcctggagatgcaagagttatggattttggatca
atctttctgctgtctcccactaaaggtgatgaagcctcgacagctccatccactgctgct
ggccagcaacctgggattaatgttgctgagctagtggtttctcgtggctttggcactgtg
attcggcatagagattttgaggaaagatcaaacttttatgatgcccttcttgctgctgaa
tccagagctattgctggaaagaaagggattcattctgcaaaggaccctccagtcatgcat
attacagacctcaccacgtcatcatccaagaaagcaaaagacttcttgccattcctgcac
agaagtaggaggatatctgctgttgttgaatacgtccttagtggtcatcgttttaaactg
ttgattcccaaggaaacatgtagcattgctttctcattctctggtgttagatgtcctggt
cgtgatgaaccctactcagaagaagcaatagctcttatgagacgaaagataatgcagaga
gatgttgaaattgaagtggaaactgttgatagaaccggaactttcttgggatccttgtgg
gagtcaaggactaacatggcagtgactcttctcgaagctggccttgcaaggtttcaaact
tcctttggcactgataggattcctgatgcacatcttcttgaacaggctgagcaatccgcc
aagaggcagaaactgaagatttgggagaattatgttgaaggagaggaaatcaatagtggt
cctgttgttgaaagcaaacagaaagaagtgctcaaggtagtggttacagaagtcttggat
ggtggtaggttctatgtccagatagttgaggataagaaaatagcctctattcagcaacag
cttgcctccctcaatctccaagaggctcctgtaattggtgcttttaatcccaagaagggt
gacattgtgcttgctcagtttagcgcagataattcatggaaccgagcaatgattgtgaat
gcacctcgtggaggcgttgagtctcccagggacaagtttgaggtgttctacattgactat
ggcaatcaggaggaggttccatacagtcacatacggcctcttgatccatcagtgtcagcg
gcacccggtcttgctcagctgtgcagcttagcgtacattaaagttccaagcttggaggat
gattgtggtccagaagcagctcagtattttagtgataacacattaaacagttcaaaagag
ttaagggcaaaggtggaagaaagggatgcttctggagggaaagttaaaggccagggaact
gggccagttgttgttgtaactctggtcgctgttgattcagagatcagcttaaatgctgcc
ctagttcaggaagggcttgccaggatagaaaagatgaggaagtgggactcgatggaaagg
aaggtggcgctagaaaatttggaaaaattccaggatgaagcacgggctgataggcgtggg
ctgtgggtgcatggagatatcgagtcagatgacgaggatgtccttcctgttaagaagacc
ggtggtcgtaggtga
DBGET
integrated database retrieval system