KEGG   Populus trichocarpa (black cottonwood): 7456935
Entry
7456935           CDS       T01077                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RHA2B
  KO
K16282  E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7456935
Enzymes [BR:pop01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     7456935
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    7456935
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-ANAPC11 zf-RING_16 zf-C3HC4_3 FANCL_C zf-RING-like zf-RING_Vps41 zf-RING_4 PHD DUF7565 zf-Nse RINGv zf_RING_Vps8_fungal Prok-RING_4 zf-C3H2C3 zf-C3HC4_4 EHMT1-2_CRR Prok-RING_1
Other DBs
NCBI-GeneID: 7456935
NCBI-ProteinID: XP_002310001
LinkDB
Position
7:complement(11086543..11087037)
AA seq 164 aa
MASFFQLLSYLYTMAIALFDLLLLRAVLLIRSAVPGSMVTHSDKLFRIITTQYFNLVEEK
NPTICYSENFRHHESRECAVCLSEFLEGESLRKLKCKHTFHKDCLDKWLEEYLATCPLCR
TRVLPEGLVANYRLLKDHIENGGSYDDATFMLSALYGDFLRRLF
NT seq 495 nt   +upstreamnt  +downstreamnt
atggcttctttcttccagctcctctcttacctctacaccatggccatagcccttttcgat
ctccttcttctaagagctgtcctcctaatccgatccgccgtgcccggaagtatggtcaca
cattctgataaactttttcgcataattaccactcaatatttcaacctcgttgaagaaaag
aacccaactatttgttacagtgaaaactttaggcatcatgaatcaagagaatgtgcggtg
tgtttgtctgagtttctggaaggtgaaagtttaaggaaattgaaatgcaagcacactttc
cacaaggattgccttgacaaatggctagaagaatacctggctacatgcccactttgcagg
actagggttttgccggagggacttgtggccaattatcgtctgctcaaagatcatatagag
aatggcgggagctatgatgacgctaccttcatgctatctgcattatatggtgatttttta
cgtagacttttctaa

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