Populus trichocarpa (black cottonwood): 7456941
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Entry
7456941 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7456941 isoform X1
KO
K20222
importin-5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
7456941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7456941
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
7456941
Pre-60S particles
7456941
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
IFRD
Vac14_Fab1_bd
Importin_rep_6
HEAT_EF3_N
Tti2
MMS19_C
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
7456941
NCBI-ProteinID:
XP_024461168
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Position
7:10964834..10973348
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AA seq
1126 aa
AA seq
DB search
MASTSPEPPSTSEESRPLTPPLSPSSTEILETAAQHALNSEDPSFLIAVLNDLDLPVLTY
RSRMILNHLIQYHPIPLCHRLSKISFSPRDTITKVTSAVALEIFKSLFPDASWGEFIKPL
LLDLKRDDYAVEIIPIINELLSHFNPHYIPENDWPGFTTAVCDNLDSDKEELLKFVLSLI
NRLFTDGAEKILELSLETLCDKLKKILRSSDVSLKVKEAAVEASFGCILRLKNAVNDEFV
QDLLRKVMNTVFFNGEINFDVSQEGYARLILDQLVALARTDAWFLRNQVDKVLEFTFIIM
ENPQYEERTRFLAIEFVLVLVEDKKGCQILVNTGGLHIKRMLSQLLCMIATINENTALDN
RDERDQEQWRLLDQVMKSMARFSQALGGRFLLEGFPQPFESCFNSEAWQRRHAAVSSLSI
ISKNCSKTLKSKVDLVANPIMKMVDDMHHHVRWRAMYAVEEFSKYLHPELQNNYNQKVLP
ALTKAMDDFSDSKIQVQAAMATYHFVEYCTSNMLEPHLDEIISKLLRCLQKGKQLLKLWA
LSALAAIAKSSQDRFLEYYRTVMPYLKVVMTKAEGESNSKLLSATVSCITAIWTVFGKDK
FGDDTQQVVQLLVSTPISNLEIHDPMRIEGLRAWGRLCKCLGHRFQPYMEVAIPCLLQSA
RLTLPDDANVEESDERNRMIQIKTETLEEKATACVLLRDCVAELKEGIDLWIDEVVNFVT
HNSFHSLTLCERNLAFLRASVQVAETLVPLLNFYEHAEVRIAAVLAMPEILKSSKAAIEK
RLLQKSPFEKLCSDIIPALVEALVKEEVIKISAVMLDSLEDCLELSGPVLNIDQIKRFLS
VIMDVLDTSISIPKVDEASEQGEKVSKKVCACLKIFMKTYKGSLLQFFDQLLSRMEHMWV
KDKTVKERKIALKIFTDVVEEFREEALKFCESELLLLFRACNDDEPEVQEVAAHGIGVAA
AFGGSIFKPLVGEAVSALNANISDSMALHRDYIKAHDAAVTALGQIYLFHKDRINASEVF
STWLSHLPIKNNLLEVKIAHDLLCSIVEISEDELLRQDFAYLPKIIAAFAEILWADDETL
ATEETVNRVIKQLTDFKSRLPSNIWSSILSTLEPSRQNVLLLSLSS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaacttcaccagaaccaccatcaacttcagaagaatcccgaccgttaacaccg
ccattatcaccaagttcaacagaaatccttgaaacagcagcccaacatgccctgaacagt
gaagacccttctttcctcatcgctgttctcaacgacctcgacctccccgttctcacctac
cgttcccgtatgattttgaaccacttaatacagtaccaccctatccccctctgtcaccgc
ctctccaaaatcagtttttcccccagggataccataactaaggtgacatctgcagttgct
ctcgagattttcaagagcctcttccctgatgcctcctggggagaattcattaaacctttg
cttcttgatctcaaaagggatgactatgcagtagaaattattccaattataaacgaactt
ttatcacatttcaatccccattatataccagaaaatgattggcccgggttcacaactgca
gtgtgcgataatttggattctgataaagaagaactgctaaaattcgtgctttcattgatt
aacaggttgtttactgatggtgctgaaaagatattagaactaagtcttgaaactttgtgt
gacaaacttaagaaaatattacgttctagtgatgtgtcattgaaggtgaaagaagcagct
gttgaggcctcttttggttgtatcttgcgccttaagaatgccgtaaatgatgaattcgtg
caagatcttttgcgtaaagtaatgaatacagttttctttaatggtgaaataaattttgat
gtgagtcaagagggatatgcgcgtttgattcttgatcaattggttgcattggcccggacg
gacgcgtggttcttgagaaaccaggttgataaggtacttgaatttacatttattatcatg
gagaatcctcaatatgaagaaagaacaaggtttcttgcgatagaatttgtgctagttcta
gttgaagataaaaaaggttgccagattttggtaaatacagggggtttgcatatcaagagg
atgctttctcaattgttatgtatgattgcgactatcaacgagaacacggcattggataat
cgtgatgagagggatcaagagcaatggagattacttgaccaggtaatgaagagcatggct
cgattttcacaagcattgggtgggagatttcttttggagggctttcctcaaccgtttgaa
tcttgctttaattcagaggcatggcaaagacgccatgctgctgttagttcactctccatt
atttcaaagaattgctcaaagacattaaaatccaaggtagatcttgtggccaatccaatt
atgaaaatggttgacgacatgcatcatcatgtgcgttggagagctatgtatgcagttgag
gaattctccaagtatttacaccctgaattgcagaataactataatcaaaaagtgctgcct
gctttaacgaaagctatggatgatttcagtgattccaaaattcaggtgcaagctgctatg
gcaacttatcactttgttgagtattgcacttcaaatatgctagaacctcaccttgatgag
attatcagtaaattgctcagatgcctacagaaagggaaacaactattgaaactttgggcc
ttatcagcattagcagcaattgctaagtcatcacaggaccggtttctagagtattacaga
acagttatgccttacctaaaagttgtgatgacgaaagcagaaggggaatctaacagcaag
ctcctttctgcaactgtttcgtgcattacagcaatttggacggtttttggaaaggacaag
ttcggtgacgatactcaacaggttgtgcaacttcttgtttccacacccatatcaaatctg
gagatacatgacccaatgagaattgaagggttaagagcatggggcaggctttgcaaatgc
ttaggccacaggttccagccttatatggaagttgccattccttgtttgcttcaatctgcg
cggctcactttgcctgatgatgctaacgttgaagaatcggatgaaagaaaccggatgatt
caaatcaaaactgagactctggaggagaaagccacagcttgtgtattgttgcgtgattgc
gttgctgaactgaaagaaggcattgatttatggattgatgaggtggttaattttgtaaca
cataatagtttccatagcttgaccttatgtgaacgaaatttagcatttttacgagcatct
gtgcaggttgctgaaactttagttccacttctcaatttttacgagcatgctgaggttaga
atagctgctgtattagccatgcctgaaatactgaaatcgtcgaaagcagcaattgagaaa
aggcttcttcagaaatctccctttgaaaagttgtgttctgatataataccagctttggtt
gaagcactggttaaggaagaagtcattaaaattagtgcagtaatgttggattccttggag
gattgcttggagttatcgggacctgttttaaatatagaccagatcaagcgcttcttgtct
gtaataatggacgttctcgacactagcatatccattcccaaagttgatgaagcgtcagag
caaggagaaaaagttagtaagaaagtttgtgcttgcttgaagattttcatgaaaacttac
aagggttccttgttgcaattcttcgaccagcttttatcacgtatggaacatatgtgggtt
aaggataaaacagttaaagaaagaaaaattgccttgaagattttcactgatgtagtagag
gaattccgagaagaagctttgaagttctgtgagagtgaactcttgttgctatttagagct
tgcaatgatgatgaacctgaagttcaagaggttgctgcacatggaattggtgttgctgca
gcctttggtggatctatcttcaaacctctggttggagaagcagtttctgctctaaatgct
aacataagcgattcaatggcattgcaccgagattacataaaggcccatgatgctgctgtt
acagctctcggacaaatatacctattccacaaggacagaatcaatgcaagtgaggtgttt
agtacatggttaagccatttgccaataaagaacaatctactcgaagtcaaaattgcacat
gatctgctgtgttcaatagttgagatatcagaggacgaacttcttcgccaagattttgct
tatcttcccaaaatcatcgctgcttttgcagagatactatgggcggatgatgaaacttta
gcaacagaggaaaccgtcaaccgagtgattaaacagttgacggactttaagagcaggtta
ccatcaaacatctggtcatctatcctgtcaaccttggaaccctctcgtcagaatgttttg
ctactttcattgtcatcgtag
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