Populus trichocarpa (black cottonwood): 7457128
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Entry
7457128 CDS
T01077
Name
(RefSeq) nuclear transcription factor Y subunit B-3
KO
K08065
nuclear transcription Y subunit beta
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7457128
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
7457128
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
7457128
NCBI-ProteinID:
XP_024461102
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All DBs
Position
7:complement(10683507..10684514)
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AA seq
223 aa
AA seq
DB search
MTGKRTQISPIGSPLSENISESSSKLEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQ
ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMSTLGFENYVGSLKVYLNKYRDTEGE
KNSMARQEDQLSPTNHGSLGTHETIKVNGSPSLSTGMDLQSFNAGLYSLGTEVTAKSYGQ
NTRFLGYQESSMVGDFNMNKIRDHGDRNGNIAMAGQLHHGVGW
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaaaaaggacccagatcagcccaatcggaagccccttgtctgagaacatctca
gaaagctcttccaaattagagcaggaccgattcctccccatcgccaacgtaagccggatc
atgaagaaatccctcccagcaaatgcaaagatatccaaagaagccaaggaaactgtccaa
gagtgtgtctctgagttcataagcttcatcacaggcgaagcatccgacaagtgtcaacga
gagaagaggaagactataaacggtgatgatcttttgtgggctatgagcacactagggttt
gagaattacgttggatccttgaaggtttatctcaacaagtatagagacactgagggagag
aaaaattctatggctagacaagaggaccagttatctcccactaaccatggttctcttggt
actcatgaaactattaaagtcaatggttctccttctctatcaactgggatggatcttcag
agttttaacgccggactctactcactcggcacggaagtaacagccaagagctatggacaa
aacacaaggttccttggttatcaggagagttcgatggttggtgatttcaacatgaataag
atacgcgatcatggagacaggaatggcaatatagctatggctggtcagcttcatcacggg
gttggctggtag
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