Populus trichocarpa (black cottonwood): 7457604
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Entry
7457604 CDS
T01077
Name
(RefSeq) 40S ribosomal protein SA
KO
K02998
small subunit ribosomal protein SAe
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
7457604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pop03011
]
7457604
Ribosome [BR:
pop03011
]
Ribosomal proteins
Eukaryotes
Small subunit
7457604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S2
40S_SA_C
Motif
Other DBs
NCBI-GeneID:
7457604
NCBI-ProteinID:
XP_002322328
UniProt:
A9P891
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All DBs
Position
15:complement(12904191..12906702)
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AA seq
312 aa
AA seq
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MATNTTAGATPAPPRELSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINL
GKTWEKLLLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQ
LQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSI
GCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEEVKPPEEEDVVAPVDYALTGPDY
MGGAADSWSTPVADSGWTNEALPIPAAPVTTSWTPDQAAGGLDPDWGAAAAPPPPPPPQQ
TASAVVDEGGTW
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaacacaacagcaggagcaaccccagctccacctcgggagctgtcgcagaaa
gaagctgacattcaaatgatgttggctgctgaagtccacctcggcaccaagaactgtaat
ttccaaatggaacgttacgttttcaagcgccgcaacgacggtatttacatcatcaacctt
ggtaagacatgggagaaacttctattggctgccagggttattgttgccattgaaaacccg
caagacattattgttcagtcagccaggccctatggtcaaagagctgttttgaagtttgct
caatacaccggtgctcatcctattgctggaaggcatactcctggtacatttacaaatcag
ctccagacttccttcagcgagcctcgtcttcttatccttaccgacccaaggactgaccac
cagccaatcaaggaagctgccttgggaaatatcccaaccattgctttctgtgacactgac
tcaccaatgcggtttgtggatattggtattccagccaataacaaggggaagcacagcatt
ggatgcctattttggcttttggcaaggatggttctccaaatgcgtggcactattcgtcca
gggcacaagtgggatgtgatggttgatttatttttctacagggagcctgaggaagtaaaa
ccaccggaagaggaagatgtggttgctcctgttgactatgcacttactggacctgactat
atgggtggtgctgctgacagctggtctacccctgtggctgatagtggatggaccaatgag
gccttgccaatccctgctgcacctgtcacaacaagctggacacctgaccaagctgctggt
ggattggatccagactggggtgctgctgctgctcctcctcctcctcctcccccacagcaa
actgcaagtgctgtggttgacgaaggtggtacctggtag
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