Populus trichocarpa (black cottonwood): 7457626
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Entry
7457626 CDS
T01077
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX10L isoform X1
KO
K20870
putative beta-1,4-xylosyltransferase IRX10 [EC:2.4.2.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7457626
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
7457626
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GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
7457626
NCBI-ProteinID:
XP_052303337
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Position
15:complement(13123115..13126913)
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AA seq
350 aa
AA seq
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MQKDPRCLTHMFAAEIFMHRFLLSSPVRTLNPKEGDWFYTPVYTTCDLTLNSLYLPFKSP
RMIRSATQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLQHATLVQ
TFGQRNHVCLKDGSITVPSYAPPQKMQTHLIPEKTPRSIFVYFRGLFYDVGNDPEGGYYA
RGARAAVWENFKDNPLFDISTEHPTTYYEDMQQAVFCLCPLSWAPWSPRLVEALIFGYIP
VIIVDDIVLPFADAIPWEEIGVFVDEKDVPNLDTILTSIPPEVILRKQRLLANPSMKQAM
LFPQLAQAGDAFHQVLNGLARKLSHDRNVYLKSGEKILNWTAGLVGDLKP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaggacccaagatgcctcacccacatgtttgcagctgagatctttatgcatcgg
ttcctattatctagccctgtacgaacgctcaatcccaaggaaggtgattggttttatacc
cctgtatatacaacttgtgatttgactctaaatagcctttatttgcctttcaaatcacca
cgaatgataagaagtgctacacaacttatttcttcaaactggccttattggaatcggact
gaaggtgctgaccacttttttgttgtgccacacgactttggtgcatgcttccactatcaa
gaagagaaggctatcgaaagaggaattcttcccttgctccaacatgccaccttggtgcaa
acttttggacaaagaaatcatgtttgcttaaaagatggctccattacagttccttcatat
gcccccccacagaaaatgcaaacccacctgattcctgaaaaaacacctcggtcaattttt
gtttacttcagaggattgttttatgatgtaggaaatgacccagaaggtggctactatgca
agaggtgcacgagcagcagtctgggagaacttcaaggacaatccactttttgacatttcc
acagagcacccaacaacgtattacgaagacatgcaacaagctgttttctgtttgtgcccc
ctcagctgggctccatggagtccgagattggttgaagcactgatatttggttatatccct
gttattatagttgacgatattgttttaccctttgctgatgcaatcccatgggaagaaatt
ggggtgtttgtagacgagaaagatgttccaaatttggacaccatactcacttccattcca
cctgaagtgatattgaggaagcagagactgcttgcaaacccttcaatgaagcaggcaatg
ctattcccacaacttgctcaagcaggagatgctttccatcaagttttgaatggacttgct
cgaaaattgtctcatgatagaaatgtttacctgaagtctggtgagaagatcttaaactgg
actgcaggcctagtcggtgacctgaaaccttag
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