Populus trichocarpa (black cottonwood): 7457658
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Entry
7457658 CDS
T01077
Name
(RefSeq) protein DNA-DAMAGE INDUCIBLE 1
KO
K11885
DNA damage-inducible protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7457658
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
7457658
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp_protease
gag-asp_proteas
ubiquitin
Asp_protease_2
UBA
Rad60-SLD
RVP_2
UBA_7
Ddi2_HDD
TBK1_ULD
RVP
Motif
Other DBs
NCBI-GeneID:
7457658
NCBI-ProteinID:
XP_002300577
UniProt:
B9GHH8
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Position
1:complement(49319977..49325660)
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AA seq
410 aa
AA seq
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MRITVMTVGEQIISLEVDPHESVENVKALLEVETQVPLQQQQLLYNGREMKNNDKLSALG
VKDEDLVMMVSNSAAISAPSNNLGLNPDGSAVNPGAFQQHLRSDSNTMAQLFQADPELAQ
AVLGNDLNKLQELLRQRHRQRSELRRQQEEEFALLEADPFDVEAQKKIEAAIRQKGIDEN
WAAALEYNPEAFARVIMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRY
KGIAHGVGQSEILGRIHVAPIKIGNIFYPCSFMVLDAPNMEFLFGLDMLRKHQCIIDLKE
NVLRMGGGEVSVPFLQEKDIPSRFLDEERYSKEASSSGNPVTSGTTVKKNDPPAGGQSSG
VARGGATQGPDFEAKVAKLVELGFGREAVIQALRLFDGNEEQAAGFLFGG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcactgtaatgacagtaggtgaacagatcatatctcttgaagttgaccctcat
gaatctgttgaaaacgtgaaagctttacttgaagtagagacgcaggtgccactccagcag
cagcagctgctctataatgggagggagatgaagaataatgataaattaagtgcattgggt
gttaaggatgaggatttggtcatgatggtctctaattctgctgctattagtgccccctcc
aataatcttggcttaaatcctgatggatctgctgtgaaccctggagctttccagcagcac
cttcgaagtgattctaatacaatggctcaactatttcaggctgatcctgaacttgcccaa
gctgttcttggaaacgatctcaacaaactgcaggaacttcttaggcaacgccatcgccaa
agatctgaattacgacgtcaacaagaagaggaatttgccctccttgaagcagatcccttt
gacgtagaggcacaaaagaaaattgaagctgccattcgtcagaaaggaattgacgagaac
tgggcagcggccttggaatacaaccctgaagcttttgccagggtgattatgttgtatgtt
gacatggaggttaatggtgtccctttaaaggcattcgttgatagtggtgctcagtccacg
ataatatcaaaaagctgtgccgagcgatgcggattgttgagacttctagatcaacgatac
aaaggcattgctcatggagttggacaatcggagatattgggtcgtattcatgtagctcca
atcaagattgggaatatattttatccttgttccttcatggtactggatgctcctaacatg
gaattcctctttgggcttgatatgctccgcaagcaccagtgtattattgatttaaaggag
aatgttttgagaatgggtggtggagaagtttctgtaccatttctgcaagaaaaggacatt
ccttctcgttttcttgatgaagagaggtattcaaaagaagcatccagctctggaaaccca
gtgacatcaggaacaacagtgaagaagaatgatccaccagctggaggtcaatcttctgga
gttgcacgcggtggcgcgacacagggacctgactttgaagccaaagttgcaaagcttgtt
gagctagggtttggaagagaggcagttatacaagctcttagattatttgatggaaatgaa
gaacaggctgctggatttctttttggcggctga
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