Populus trichocarpa (black cottonwood): 7457665 Help Entry 7457665           CDS       T01077                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism pop  Populus trichocarpa (black cottonwood) Pathway pop03013   Nucleocytoplasmic transport pop03040   Spliceosome Brite KEGG Orthology (KO) [BR:pop00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     7457665   09122 Translation    03013 Nucleocytoplasmic transport     7457665  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pop03019]     7457665    03041 Spliceosome [BR:pop03041]     7457665 Messenger RNA biogenesis [BR:pop03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      7457665 Spliceosome [BR:pop03041]  Complex C   Other components    EJC/TREX     7457665  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     7457665 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_NOL10_N Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_Vps41 WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st eIF2A NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_DCAF12 Tricorn_2nd PAC11 WDR90_beta-prop_4th Beta-prop_IFT80_2nd TRM82_WD Beta-prop_NUP159_NUP214 DUF7099 Beta-prop_WDR41 Beta-prop_ACSF4 Beta-prop_Nup120_160 Beta-prop_WDR11_1st WD_LRWD1 Motif Other DBs NCBI-GeneID:  7457665 NCBI-ProteinID:  XP_002300586 UniProt:  A0A2K2CEE1 A9P9W4 LinkDB All DBs Position 1:complement(49416019..49418824) Genome browser AA seq 313 aa AA seqDB search MEETIPFKNLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIDLHGHGKIKDIE LKGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQTELSGENINITYRPDGT HVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEMFLLTTGNGTVEVLSYPSL QPLETVMAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISF NHTGDFIASASEDLFIDISNVHTGRSVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQT DEGVFRIFGFESA NT seq 942 nt NT seq  +upstreamnt  +downstreamnt atggaggaaacgataccgtttaagaatctccatagcagagagtatcaaggtcacaaaaag aaggttcactcagtggcatggaattgcactggaactaagcttgcttcaggttctgttgat caaactgctcgtgtttggcacattgatcttcatggccatggtaaaattaaggatattgaa ttgaaggggcatgcagatagtgtggatcagctttgttgggatcctaagcatgctgattta attgcaactgcttccggtgacaagactgtccgtttatgggatgctcgtagtgggaagtgc tcacagcaaacagaacttagtggggagaatataaacatcacctacaggcctgatggcact catgttgctgttggtaatagggatgatgagctaactatactggatgttcgaaaatttaag ccaattcataggaggaagttcaattatgaggtaaatgagattgcttggaacatgacaggg gagatgttccttttgactactgggaatggtactgttgaagtactatcatacccatctctt caaccacttgaaactgtcatggctcatacagctggttgctactgcattgcaattgatcca aaaggaagatattttgctgttggaagtgctgattccttagtcagcctttgggatatctca gaaatgctttgcgtgcgaacatttacgaaacttgaatggcctgtccggacaataagcttc aatcacacaggagattttattgcttctgccagtgaagacttattcatagatatttccaat gtccatactgggcgatcagtgcatcaaatcccatgccgtgctgccatgaacagtgtggag tggaaccccaagtacaatttacttgcttatgctggggatgacaagaacaaatatcagact gatgaaggtgtttttcgaatatttggctttgagagcgcctga

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