Populus trichocarpa (black cottonwood): 7457713 Help Entry 7457713           CDS       T01077                                  Name (RefSeq) E3 ubiquitin protein ligase RIN2   KO K10636   E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36] Organism pop  Populus trichocarpa (black cottonwood) Pathway pop04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:pop00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     7457713  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:pop04121]     7457713 Enzymes [BR:pop01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)      7457713 Ubiquitin system [BR:pop04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     7457713   Multi subunit type E3    ERAD complex     7457713    LMBR1L-GP78-UBAC2 complex     7457713 SSDB OrthologParalogGFIT Motif Pfam:  TPR_SYVN1_N zf-RING_2 CUE zf-C3HC4 zf-rbx1 zf-RING_UBOX zf-ANAPC11 zf-C3HC4_2 zf-RING_11 zf-RING_16 zf-RING_5 zf-C3HC4_3 zf-RING_Vps41 zf-C3HC4_4 U-box_ZFPL1 FAR1_N zf-HC5HC2H E3_UbLigase_EDD FANCL_C Endonuclease_7 zf_RING_Vps8_fungal PHD Motif Other DBs NCBI-GeneID:  7457713 NCBI-ProteinID:  XP_024442989 LinkDB All DBs Position 1:complement(10207073..10214869) Genome browser AA seq 587 aa AA seqDB search MGVSYIAISAVCTALSFVGLQWWTEVSLDRLRSDGLIGENFINSENVNRALELLFSSYAT IALLVNFVFNVFLLLNLCLKTIFFGELYSSETRKLVERLINYAIYKGTFLPLVIPPTISQ TGLWSIWLTVLCSLKMFQALARDRLERLNASPSATPWTYLRVYSALLLVLSVDFFWIQMC FVIYRSTGSSMFLLLFFEPFSIAFETMQAMLVHGFQLLEIWFHHSAGNSTNCQRFKFFDA MRAGSLLEWKGVLIRNLGFSLDMATLLMALGHYVYIWWLHGVAFHLVDAVLFLNIRALLS AIIKRIKGFIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCSHIFHLV CLRSWLDQGLNEIYSCPTCRKPLFVDRPENEASTHTGEALTDEQLAHQINEGRDRQNTPG HVLSAGVFPNQIRNSMEGSPWRSAGLDSSWLPTWPSQGGDGAGPSTAMRSVGLGRVQMMM RHLASVGETYAQTALEDAAWSLWPTNPSHATPSTSFIPPAAGGRRPGGTGGLHVSTTSRT TNDNIANILAMAETVREVLPHIPDELILQDLQRTNSATVTVNNLLQR NT seq 1764 nt NT seq  +upstreamnt  +downstreamnt atgggtgtgagttatatagcgatttcagcagtatgtacggctttgagttttgtgggtctt caatggtggacagaggtgtctttagatagattgagatcagatggtttgattggtgagaat tttatcaactcggagaatgtcaaccgcgcgcttgagcttctgttcagttcttatgcaacc attgcattgttggtgaattttgtattcaatgtatttctactactcaatctttgtctcaag actattttctttggagagttatattcttctgaaactcgaaaactagtggaacgtcttatt aattatgctatttacaagggaacctttctgccactggttattccaccaacaatttctcaa acaggtctctggtcaatttggttgactgttctatgttctttaaagatgtttcaagcacta gctagagatcgacttgaacgtttgaatgcatctccttctgcaactccatggacatatctt cgtgtttattcagcattgttgctggtcctctctgttgactttttctggatacagatgtgt ttcgtgatatacagaagtacgggctcgtccatgtttctgttgttgttctttgagcctttc agtattgcttttgagaccatgcaagctatgctggttcatggatttcagttgcttgagatt tggttccatcattcggctgggaatagcacaaattgccaaaggttcaagttttttgatgca atgagagcaggttcattgttggagtggaaaggcgttcttatccggaacttgggtttttcg ctagacatggcaaccttattaatggcacttggtcattatgtgtatatatggtggcttcat ggtgtggcatttcatcttgtggatgcagttctctttttgaatatacgtgcattgctaagc gctatcataaagcgtataaaaggattcatcaagcttagaatagctttaggtgcccttcac gcagcacttcctgatgcaacatctgaagagctacgagcatatgatgatgaatgtgctatc tgtagggaacctatggctaaggccaaaaggctacattgcagtcacatatttcatcttgtt tgcttgagatcttggttggatcagggtttaaatgagatatactcatgccccacttgtcgg aagccactttttgtagacaggcctgaaaatgaagcaagtactcatactggagaagctcta acagatgaacaacttgctcatcaaataaatgaaggacgtgatcggcaaaacactccaggt catgtgctgtctgctggagtattccctaaccagattcggaactctatggaaggcagccct tggagaagtgcagggttggattcaagttggctacccacttggcccagccagggtggagat ggggctggtccctcaacagctatgagatctgttggattgggtagggttcagatgatgatg aggcatcttgcatctgtgggagaaacttatgcacaaactgcccttgaagatgctgcttgg agcctttggccaacgaatccatctcacgctactccatctacctctttcatccctcctgct gctggtggaagacgccctggtggcactggtggtttacatgtgagcaccacatcacgcacc acaaatgacaacatagcaaacatacttgccatggctgagacagtgcgggaggttttgccc cacatcccggatgagttgatactccaggacttgcagcgaacaaattctgctactgttact gtaaataatctcctgcaaaggtga

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