Populus trichocarpa (black cottonwood): 7457942
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Entry
7457942 CDS
T01077
Name
(RefSeq) WD repeat-containing protein GTS1
KO
K24758
WD repeat-containing protein 89
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pop04990
]
7457942
Domain-containing proteins not elsewhere classified [BR:
pop04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
7457942
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GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
WD40_RFWD3
WD40_like
DUF6567
B-prop_COPA_B_2nd
Beta-prop_VPS8
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
7457942
NCBI-ProteinID:
XP_002320348
UniProt:
B9I9S6
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All DBs
Position
14:8739201..8743540
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AA seq
378 aa
AA seq
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MEGTTEMEIEEPKSKKFGLKNSIQTNFGNDYVFQIVPKDDWSSVAVSLSTKAVKLYSPVT
GQFQGECKGHSDTINQIAFSVSSSPHLLHSCSSDGTIRAWDTRNFQQVSCIDSGSSQEIF
SFSFGGSNDNLLAAGAKSQVLFWDWRNGKQVACLEESHIEDVTQVHFVPDNRNKLLSASV
DGLMCIFNTDGDINDDDDLESVINVGTSIGKVGFFGETYQKLWCLTHIESLSIWDWKDSR
NEANFLEARSLASDSWTLDHVDYFVDCHYPGEGDSLWLIGGTNAGALGYFPVNHKGIGSP
EAILGGGHTGVVRSVLPMSSMKGGPAQSRGIFGWTGGEDGRLCCWLSDDSTGINRSWISS
ALVKKSPKARKKKRRTPY
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaacgacagagatggagattgaggaaccgaaatcaaagaaattcgggctaaaa
aactcaattcaaaccaatttcggcaacgactatgttttccaaattgtcccaaaggatgac
tggtcgtcagtggcggtgtcgctatcgacaaaagcagtgaagctttattctccagtgaca
ggtcagttccaaggagagtgtaaaggtcactctgatactatcaatcaaattgcattctct
gtttcatcgtctccgcatcttttgcattcttgctcttctgacggtactatcagagcttgg
gacaccagaaatttccaacaggtttcgtgtatagattccggctcttctcaagagattttc
agcttttcatttggaggttctaatgataatcttcttgctgctggcgctaagtctcaggta
cttttctgggattggaggaatgggaagcaagttgcatgtttggaggaatctcatattgaa
gatgttactcaggttcactttgtccctgacaatagaaacaagcttctttcagcttccgtt
gatgggttgatgtgtatatttaatactgatggggatatcaacgatgacgatgatctggaa
tcagtgattaatgttggaacttcaatcgggaaagtggggttttttggagagacatatcag
aagctctggtgtttgacacatatcgaaagtttaagtatttgggattggaaggattcaaga
aatgaagcaaactttctggaagctcgctcattagcctctgacagctggacattagaccat
gttgattattttgttgattgccactaccccggagaaggtgatagtttatggttaatcggt
ggcactaatgccggtgctttaggttattttcctgtaaatcataaaggaattggatctcca
gaagcaattcttggaggggggcacacaggtgttgtcaggagtgtattgcccatgtcaagc
atgaaggggggacctgcccaaagccgaggcatatttggatggacaggtggtgaggatggt
cgactatgttgctggttgtccgacgattccactgggataaatcgatcatggatttcaagt
gcattggttaagaaatcaccaaaggctcgcaagaaaaaacggcgtactccttactag
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