Populus trichocarpa (black cottonwood): 7457965
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Entry
7457965 CDS
T01077
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 5
KO
K18342
OTU domain-containing protein 6 [EC:
3.4.19.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7457965
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
7457965
Ubiquitin system [BR:
pop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
7457965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
PIG-L
Ndc1_Nup
SprB
Motif
Other DBs
NCBI-GeneID:
7457965
NCBI-ProteinID:
XP_002321034
UniProt:
B9I9W0
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All DBs
Position
14:complement(8992870..8995003)
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AA seq
326 aa
AA seq
DB search
MSDAQEIQDQPTEAIPANVSQKEEESRDEMLSRHRKEIRQLQNKEIEMKKAAAKGSKAEQ
KAKKKLVEEEVSQLSAKLKEKHAEELASLGYNSTNGNESSNLDNLVKAVAGVSVTNQPEH
SKPSKSAKRRGKRAQQEAEREQRIQEEQSNLESDRMIEDEKLERKLEPLGLTINEIKPDG
HCLYRAVEDQLALLSGGSAPYDYQELRKLVAAYMRENSPDFLPFFLSDTITEEHSDHSLS
DRFENYCKEVESTTAWGGQLELGALTHCLRRHIKIFSGSFPDVEMGKEYKSDGGAGSSNA
SIMLSYHKHAFGLGEHYNSVVPNLIQ
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgctcaagaaatacaggatcaaccaactgaggcaattccggccaatgtgtct
caaaaggaagaggaatcccgtgatgaaatgctttctcggcacagaaaggagataagacag
ctgcagaacaaagaaattgaaatgaaaaaggcagctgcaaaaggtagcaaggcggaacag
aaagctaagaaaaagttggtcgaggaagaggtctctcaactatctgcaaagctaaaagaa
aaacatgctgaagaacttgcttctttaggttacaacagtactaatggaaatgagagtagc
aatcttgacaacttggtgaaggctgtagcgggggtttctgttaccaaccagcctgagcat
tcaaagcccagcaagagcgcaaagagacgggggaaaagagctcagcaagaagcagaaaga
gaacaaagaatacaagaagagcagagcaaccttgaaagtgatcgaatgattgaagatgaa
aaattggaaagaaagcttgaacccctcgggttgactataaatgaaataaagccagatggg
cactgcctctaccgagctgttgaagatcagctggcactcctttctggaggttcagcacca
tatgattaccaagagcttcgaaaattggtggctgcctatatgagggaaaactcaccagat
ttcctcccttttttcctgtcagatactattaccgaagaacactctgatcattcactctca
gatagattcgagaattactgtaaagaagttgagtctacaacagcatggggagggcagctg
gagcttggggctctaactcactgcctccggaggcatatcaagatattttcaggatcattc
cctgatgtggagatgggaaaggagtacaaatctgacggtggtgctggttcatcaaatgca
agcattatgttgtcgtaccataagcatgcgtttggtcttggggagcactataattctgtt
gttccaaatttgatccaatag
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