Populus trichocarpa (black cottonwood): 7457989
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Entry
7457989 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase SP1
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7457989
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7457989
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7457989
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
Prok-RING_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
7457989
NCBI-ProteinID:
XP_006375473
UniProt:
A9PFT8
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All DBs
Position
14:complement(9385767..9390024)
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AA seq
343 aa
AA seq
DB search
MMIPWGGISCCLSGAALYLLGRSSGRDAEVLKSVAKVNQLKELAKLLDIESKVLPLVVAI
SGRVGAESPISCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDG
TDRVYVVGARGASGFVLTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTGTSL
TVVGEAVKDDIGTVRIQRPHKGPFYVSPKSIDELIGNLGKWARWYKYASLGLTVFGAFLI
TKHVIRYIMERRRRWELQSRVLAAAKRSGQDNEGSNDKAENGSDGAKRERPIPDLCVICL
EQEYNAVFLPCGHMCCCITCCSQLSNCPLCRRRIEQVVKTFRH
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcccatggggtggaatcagttgctgtttgagcggagctgctctctatttactt
ggcaggagcagcggcagggatgcggaggttcttaagtcagttgcaaaagtcaatcagctg
aaggaattggcaaagttgctggatattgaaagtaaagtcttaccactggttgttgcaatc
tctggaagagttggtgctgagtctccaataagttgcgagtttagtgggttgagaggtgtt
atagtagaggagacggctgaacaacatttcctcaagcacaatgatgctggatcctggatt
caggactcagccttaatgctatcaatgagtaaagaggtcccatggtacctggatgacggc
actgaccgagtgtatgttgtgggggcccgaggtgcttctggttttgtgttgactgttgga
agcgaagtgtttgaagagtcaggacgatcacttgtacgaggaacattagactatctccaa
ggcctcaagatgcttggagttaagcgaattgaaagggtacttccaactggtacttcattg
actgtggttggcgaggctgtcaaagatgatattggaacagttcggattcagcgtcctcat
aaaggacctttttatgtatccccaaagtcaattgatgaactcattgggaatttggggaag
tgggcaaggtggtataagtacgcctcattgggtttgacagtttttggtgctttcctgatc
accaagcatgttatacggtatatcatggagagaaggcgccgttgggaattgcagagcagg
gttcttgccgctgctaagagatcaggccaagataacgagggttcaaatgataaggctgag
aacggttcagatggtgccaagagagaacgtccaattccagatctatgtgtgatatgcctt
gagcaggagtacaatgctgtttttctcccgtgtggtcatatgtgctgttgtataacatgt
tgttcgcaattgagcaactgtcctctttgtcgaagacggatagagcaggtagtgaagact
ttccgccattga
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