KEGG   Populus trichocarpa (black cottonwood): 7458001
Entry
7458001           CDS       T01077                                 
Name
(RefSeq) transportin MOS14 isoform X3
  KO
K15436  transportin-3
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03013  Nucleocytoplasmic transport
pop03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    7458001
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    7458001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pop03016]
    7458001
Transfer RNA biogenesis [BR:pop03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    7458001
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd IBN_N SP24
Other DBs
NCBI-GeneID: 7458001
NCBI-ProteinID: XP_002321068
UniProt: B9IA38
LinkDB
Position
14:complement(9577737..9595177)
AA seq 1008 aa
MDLQMKVAQAVHVLNHDTQSCNRVAANQWLVQFQQTDAVWEVATSILTSDHLHLQQQTPP
PPFVSDLEVEFFAAQILKRKIQSEGHSLQLGVKDALLNALLVAAKRFSSGPPQLLTQICL
ALAALMLCAVEHGKPIEQLFYSLRTLQSQDDGNVAVLEMLTVLPEEVVDTQNTDCRLLSH
TPMVLEFLLEQSQKISDGGVQLHERNRKVLRCLLSWVRAGCFSEIPRDSLPTHPLLNFVF
NSLQVPSSFDLAIEVLVELASRHEGLPQVLLSRVHFLKEVLLISALSSRDEKVISGLSCL
MSEIGQATPSLIVEASVEGLALADALLSCVAFPSEDWEIADSTLQFWSSLASYILGLDAE
GAKNRKHSEDMLFSVFSALLDALLLRAQVDESTFIDESETVDLPDGLAHFRMNLVELLVD
ICQLLKPTRFVQKLFFGGWASPNVSIPWKEVETKLFALNVVSELILQESQVFDFSVIMQL
VTIFSSIPPNKLKGFMCIVYRSLADVVGSYSKWISTFQTIARPLLLFLAAGISEPQSSNA
CASALRKFCEDASTVIYEPANLEVLMWIGEALEKRQLPLEDEEEVVSAISMILGSVTNKE
QKNSLLARLLSSCYEAIGKLVNEGSSDSFRQNPAAYTQILNSAARGLYRMGTVFSHLVMP
HPSGPAADDPIFGLLSTFWPMLEKLLRSEHMENSNLSTAACRALSLAIQSSGQHFALLLP
SVLDCLSTNFLSFQSHEWYIRTASVVIEEFSHKEEFGPLFVITFERFTQATSVMGLNSSY
ICDQEPDLVEAYTNFASTVVRGTHKEVLAASGSLLDVSFQKAAICCTAMHRGAALAAMSY
LSCFLEVGLISLLESKNCILEGSYSAISIQVISRNGEGLVSNLVYALLGVSAMSRVHKCA
TILQQVASFCSLSETTTWKVVLCWESLHGWLHAAVQALPVEYLKQGEAETLVPVWMEALV
GAASDYLGSKTFNGEKNNYGHMQGKGGRVLKRIIREFADSHRNVPNLT
NT seq 3027 nt   +upstreamnt  +downstreamnt
atggacctgcaaatgaaagtagcccaggcggttcatgtcttgaatcacgatacccaatcc
tgcaaccgcgtcgctgccaatcaatggctcgttcagttccagcagaccgacgccgtttgg
gaggtcgccacttccattctcacctccgatcatctccaccttcagcagcagacgccgccg
ccgccttttgtctccgatttagaagtcgagttcttcgcggcacagattctcaaacgaaag
atccaaagtgaaggccattctttgcagttaggagttaaagatgctttgttaaatgctctt
ctcgtggctgccaaaagattcagttcaggtcctccccagcttttaacacaaatctgcctt
gcacttgctgcccttatgctttgtgccgttgagcatggaaaacctatcgagcagcttttc
tacagtcttcggactctgcagagccaggatgatggtaatgttgctgtgctggagatgctc
actgttcttcctgaagaagttgttgacactcaaaatactgattgtagacttctctcacat
actcctatggttcttgagtttctactggagcaatctcagaaaatttccgatggtggtgtt
caactgcatgaaagaaacaggaaagttctccgttgcttattgagctgggtacgagctggc
tgcttctcagaaattcctcgagactcattgccaacgcatccacttcttaattttgtgttc
aactctttgcaggttccatcttcatttgatctggctattgaagtccttgttgaacttgca
agtagacatgaggggctacctcaggttttgttatccagagtacattttctcaaagaggtg
cttcttatttcagctcttagcagcagagatgagaaagtgattagtgggctttcatgcttg
atgtcagaaattgggcaggcaacaccttctctgatcgtagaggcaagtgttgagggcctt
gcacttgcagatgctttattgagctgtgtggcatttccaagtgaagactgggagattgca
gactcaacattgcaattttggtctagtcttgcaagctatatacttggtcttgacgcagaa
ggtgcaaaaaataggaaacattctgaagacatgttgttttctgtattttcagcattgttg
gatgctcttttattgcgcgctcaggttgacgaatctacattcattgatgagagtgaaaca
gttgatttgcctgatggtcttgcgcatttcaggatgaatcttgttgaacttttggtggat
atttgtcagcttctaaaacctacaagatttgtacaaaagcttttctttggtggttgggca
tcaccaaatgtatcaataccttggaaggaagttgaaaccaaactgtttgctcttaatgtg
gtctctgaattgattctacaagagagccaggtcttcgacttctcggtgattatgcagttg
gtgacaatcttttccagtatccctcccaacaagcttaagggatttatgtgcattgtatac
aggtcactcgcagatgttgttggttcctattccaagtggatttctacatttcaaactatc
gctaggcctttactattatttcttgctgcgggcatttcagagccccagtcctcaaatgct
tgtgcctccgccctgcgcaaattttgtgaagatgcttctacagttatttatgaacctgca
aatctggaagttttgatgtggataggagaggctttggagaagaggcaattacctttggaa
gatgaggaggaggtagttagcgcgataagtatgatccttggttctgtaacaaacaaagag
caaaagaacagcctgttggctaggctgctttcttcttgctatgaagctatagggaaactg
gttaatgaaggcagcagcgattcattcagacaaaatccagctgcttatacgcaaattttg
aactcagcagcaagagggttatacaggatgggaactgtatttagtcatcttgtaatgcct
catcctagtggtcctgctgctgatgatcctatatttggtctgctaagcaccttttggccc
atgttagagaaactacttaggtctgaacacatggagaatagtaatttatctaccgcagct
tgccgagctctttcactggcaattcagtcgagcgggcagcactttgctttgctattgccc
agtgtactagattgcctatcaaccaattttttgtcattccagagtcatgaatggtatatc
agaacagcttctgttgtcattgaagaattcagtcataaagaggaatttggacctttgttt
gtcattacttttgaaagatttacacaagcaacatcagttatgggtcttaattcttcatat
atatgtgaccaagagcctgatttagtggaggcttacacaaattttgcttccactgtggtg
cgtggtactcataaggaagtattagctgcatctggttctctccttgacgtttcctttcaa
aaggcagctatatgctgcactgctatgcatcgaggagcggcgctggcagcaatgtcatat
ttgtcatgcttcttggaagttggcctaatctctttgttggaatccaagaattgtattctc
gaggggtcatacagtgccatatcaattcaggtcatatctcgtaatggcgagggacttgta
tcaaatttagtgtatgctttgctcggcgtttcagcaatgtcacgggttcacaaatgtgca
acaatcttgcaacaggtggcttcattttgcagtttaagtgagacaacaacttggaaggtt
gttctgtgttgggagtctttgcatggatggctacatgcagcggtgcaggctcttccagtt
gagtatctaaagcagggggaagctgaaacattagtaccagtttggatggaggccctcgtt
ggtgctgcttctgattatcttgggagcaagactttcaatggggaaaagaataactatggg
catatgcaaggaaagggaggaagagttttgaagcgcataattcgagaattcgctgatagc
caccgcaacgtccccaatttgacctaa

DBGET integrated database retrieval system