Populus trichocarpa (black cottonwood): 7458038
Help
Entry
7458038 CDS
T01077
Name
(RefSeq) probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7458038
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7458038
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7458038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
DUF1351
SE
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
7458038
NCBI-ProteinID:
XP_006376864
UniProt:
U5FXL5
LinkDB
All DBs
Position
12:complement(10741759..10745198)
Genome browser
AA seq
331 aa
AA seq
DB search
MFGGNNSNPLVPISFGENHILDDVNALPQLQLLGDYPVGCFGVSHTSNQQTAIFGQPAKR
VNETESISGQKKHQLSSSNNFSQYDACKSGIILNPNHVSIGLKLSCEEDEHNSSVTCTSE
SNTATLPVTLSLGDDLKAEINLQKGDLDQYIRLQEENFIKGVRELGQRHTVSLLSSIEQG
ISSKLHEKELQMQNINRKNKDLVERIKQVSMEVHSWHCRTKYNESVVNVLKSNLEQVMAQ
GAMHGKEGYGDSEVDTAASYANQNHMRLVDGSANSISLKKQMTCRACKINEASILLFPCR
HLCLCKVCEGLIDVCPVCRIAKSSSVEVFLS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaggtaataacagcaatcctttggttccaatttcctttggcgaaaaccacatc
ttggatgatgttaatgcactgcctcagctgcagctactcggggattatccagttgggtgc
tttggggtctctcacaccagcaatcagcagacagcaatctttggccagcctgctaaaaga
gtcaatgagacagaatccatttccggacagaaaaagcatcaattatcatcaagtaataac
ttcagccaatatgatgcctgtaaatcgggaatcattctgaatcctaatcatgtatcaatt
ggattgaaactatcttgtgaggaagatgaacataactcttctgttacttgtacaagtgaa
agtaatacagctaccctccctgtgacgttgtctctcggtgatgatcttaaagcagagatt
aatttgcagaaaggggatttagatcagtatattagactgcaggaagaaaatttcataaaa
ggtgtgagagaattggggcaaagacatacagtttcattgctgagttccatagaacaagga
attagcagcaagctacatgagaaggagcttcaaatgcaaaacataaaccgcaagaacaag
gatctagtagagagaataaagcaagttagcatggaagtccattcctggcactgcagaaca
aaatataatgagtctgtagttaatgttctgaaaagcaatctggagcaagtaatggcacaa
ggtgcgatgcatggcaaggaaggttatggggacagtgaggtcgacactgcagcctcttat
gctaaccaaaaccatatgcgccttgtggacggttctgcaaattcaatctccttgaaaaag
cagatgacttgcagagcttgcaagatcaatgaagcttccatcttgttatttccatgtaga
cacttgtgcctctgcaaagtttgtgaagggctcatagatgtttgccctgtgtgccgtata
gcgaagtcttcaagtgttgaagtgtttctgtcctaa
DBGET
integrated database retrieval system
