Populus trichocarpa (black cottonwood): 7458084
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Entry
7458084 CDS
T01077
Name
(RefSeq) elongator complex protein 3-like
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7458084
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
7458084
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
7458084
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Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
7458084
NCBI-ProteinID:
XP_052301684
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Position
12:11758668..11763086
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AA seq
563 aa
AA seq
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MATAVITETKKLPRPGRGGYQPHVLTEEEARVRAIAEIVNSMVELSRKNQTVDLNALKSA
ACRKYGLARAPKLVEMIAALPESDRESLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIAT
TGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDK
VEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTIETRP
DYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAH
MMPDLPNVGVERDLESFREFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQ
LVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTR
EAGIQDIHHKIKPEEVQLVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGCNVTCPE
LMGKCSIVRELHVYGTAVPVHGRDAEKLQHQGYGTLLMEEAEHIARKEHRSTKIAVISGV
GTRHYYRKLGYELEGPYMVKFLS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcagtaattaccgagaccaaaaaactcccgcggccgggtcgcggcgggtac
caacctcacgtactaaccgaagaagaagctagagtccgagccatagccgaaatcgtcaat
tccatggtagagctttcgagaaaaaaccaaaccgttgatcttaacgccctaaaatccgcc
gcctgtcgcaaatacggccttgcacgtgctccaaaactcgtcgagatgatcgcagcgttg
ccggaatccgatcgcgagtcactgctaccgaaactccgggctaaaccggtacgcaccgca
tcaggaattgcagttgttgccgtcatgtcgaagccgcaccggtgtccgcatatcgcgacg
acagggaatatttgtgtgtattgtcctggtggaccggactctgattttgagtacagtact
cagtcgtatactggttatgaacctactagtatgcgtgcgattcgtgctagatataaccca
tatgtccaggctagaagcaggattgatcagcttaagagactgggtcatagtgtagataag
gtggagttcatattaatggggggtactttcatgtcattgccagcagattaccgtgattac
tttataaggaatcttcatgatgctttatcagggcacacatctgccaatgttgaggaggca
gttgcctactccgagcatggtgcaacaaagtgcattggcatgacaattgagacgaggcca
gattattgtcttggtcctcatctacgccaaatgctttcatatgggtgcacacgattggag
attggagttcaaagcacgtatgaggatgttgctcgagacactaatagaggacacactgta
gctgctgttgctgattgtttttgcttggcaaaggatgctggttttaaggttgttgctcat
atgatgcctgatcttcctaatgttggggttgagagagacttggaaagttttcgagagttc
tttgagagtccttcttttagagcagatgggctcaaaatttatcctacacttgtaattcgt
ggaactgggctttatgagctatggaaaactggcaggtatagaaattacccacctgagcaa
cttgtagatattgtagcaaggatcctagccatggtacccccttggacacgtgtatataga
gttcaacgagatattcctatgcctttagttacatctggagttgagaaaggaaatctcagg
gagttagccttagctaggatggatgatttgggcctgaaatgccgtgatgtccgtacacgt
gaggctggaatccaggacattcatcacaaaattaagccagaagaagttcagctagttcgc
cgtgattatactgctaatgaaggctgggaaacatttctttcctatgaggatacacgccag
gatattcttgttgggctactgcgcttacgaaaatgtggctgcaatgttacttgccctgag
cttatggggaagtgctctattgttcgtgaactccatgtttatggaactgcagttcctgtt
catgggcgtgatgcggagaagctgcaacaccagggttatggtacacttttgatggaagag
gcagaacacattgctcgcaaggagcatagatcaaccaaaatagctgtcatttcaggtgta
ggaacccgtcattactacagaaaattgggctatgagcttgaagggccatacatggtgaaa
tttctttcttga
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