Populus trichocarpa (black cottonwood): 7458095
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Entry
7458095 CDS
T01077
Name
(RefSeq) syntaxin-81 isoform X1
KO
K08492
syntaxin 18
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
pop04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
7458095
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
7458095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7458095
Membrane trafficking [BR:
pop04131
]
SNARE
Syntaxin (Qa)
Stx-rER
7458095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
STX6_10_61_N
hSac2
Motif
Other DBs
NCBI-GeneID:
7458095
NCBI-ProteinID:
XP_002316241
UniProt:
B9HT21
LinkDB
All DBs
Position
10:complement(18881686..18885938)
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AA seq
311 aa
AA seq
DB search
MAKIRDRTEDFKDAVRHTAVSLGYNEAKLAAIMASFIIHKPRQRSPFTKAALKTLESIGA
LEQFMLKHRKDYVDLHRTTEQERDSIEQEVTAFIKACKEQIDILKDSINNEEANTKGWLG
IKADTSNADTIAHKHGVVLILSEKLHSVTARFDQLRAIRFQDAINKRIPRRKVNRAANKN
TSSVDSSKTNNLDFMEPDEIQPEPLRVQQQLLDDETRALQVELTSLLDAVQETETKMVEM
SALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELSQAVQRNSSSRTFLLLFLFVL
TFSILFLDWYS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaattagagacagaacagaggattttaaagatgcagtaaggcacactgctgtt
tccttaggttacaatgaggccaaattggcagccattatggcgtcctttatcattcataaa
ccacggcaaaggtcaccgtttactaaagctgctcttaaaacgcttgaaagcattggagct
ttagaacaatttatgttgaagcataggaaggattatgttgatctgcatcgtaccaccgaa
caggagagggatagcattgaacaagaggttactgcatttattaaagcatgcaaagaacaa
attgacattctcaaggatagcataaacaatgaagaagcaaatacaaagggatggcttggc
atcaaggctgatacctccaacgctgatactatagcacacaaacatggagtggttttgatt
ttaagtgagaaacttcattctgtcactgcacggtttgatcagcttagagccatacgcttc
caggatgctattaataagaggataccaaggagaaaagttaaccgggctgcaaataaaaat
acaagctctgttgattcctctaaaacaaacaatttagattttatggaacctgatgaaatt
cagccggagcctcttagagttcaacagcaattgttggatgatgaaactcgtgccctacag
gtggagttgactagtcttctagatgcagttcaagaaactgaaactaagatggtagaaatg
tctgcattgaatcacctcatgtccacacatgttctgcaacaagcacaacaaatagagctt
ctgtatgagcaggcagttgaagctacaaagaacgtagagcttggaaacaaagagttgtcg
caggcagtacagcggaatagcagtagcaggacttttctcttgcttttcctttttgtgctt
actttttcaatcctctttctagattggtatagctga
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integrated database retrieval system