Populus trichocarpa (black cottonwood): 7458170
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Entry
7458170 CDS
T01077
Name
(RefSeq) oxysterol-binding protein-related protein 2A isoform X1
KO
K20456
oxysterol-binding protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
7458170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7458170
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
7458170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Oxysterol_BP
PH
PH_11
Motif
Other DBs
NCBI-GeneID:
7458170
NCBI-ProteinID:
XP_024453931
LinkDB
All DBs
Position
3:complement(13388484..13397075)
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AA seq
771 aa
AA seq
DB search
MVIKMRVKEMHPLCCISLESSEVRSQSPDATLTRARSLPETFFGGSNGNVGRTEAGSKAT
VAGVLYKWTNYGKGWRSRWFLLKNGVLSYSKIRRPPESINLGDDVRLIGEISTNRLLRLD
SRGGSGRQKLQKTVGLVHLKISSFRESKSDDKRFYIFTATKTLHLRTDSKRDRVAWIRAL
VSTSSLFPSRSLNDSISLVPNDLSISTDRLKKRLLEDGINENIVKDCEQIMLSEFSEIQV
QVKVLCEERSNLLDTLRQLEAANIENETSGIPDGEYQLTKHEFSSLGRGKYSEYSTTESS
DDIEKQELEEVSDEDGTSFYDTKEYFTELAVSGLSMTEVSKYSEKDRRFNQLDNEEKMNA
EKRVCSSGYPNIERRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQK
CFEDLEYSYLLDRAYEYGKAGNSDLRILNVAAFAVSGYASSEGRHCKPFNPLLGETYEAD
FPDKGVRFFSEKVSHHPTLIACHCEGRGWKFWGDSNLRTKFWGRSIQLDPVGILTLEFDD
GEIFQWSKVTTTIYNLILGKLYCGHHGMMHIQGNRQYSCKLKFKEQSILDRNPHQVQGFV
EDASGNKVASLFGKWDDSMYYTTGDETGKPKDRIPSSNATLLWKRNKPPLNLTRYNLTTF
AITLNELTPGLQIKERLPPTDSRLRPDQRHLENGEYEKANAEKQRLERRQRMSRKLQEHG
WKPRWFQKEGDNGSFRYGGGYWEAREQGNWDGCPNIFGEFNEDLVESSEGP
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggttataaaaatgagggtcaaagaaatgcatccattatgctgcatctcactagagagt
tcagaagttcggagccaatcaccggatgcaacgttgactcgagcaagatcgttgccggag
acatttttcggtggatctaacggcaatgtagggaggacagaggcgggatcgaaggcgacg
gtggctggagtgttgtacaagtggacgaattatgggaaagggtggagatcgcggtggttc
ttgttgaaaaatggtgtgctttcttactcgaagattcgacggccaccggagagtattaat
ctgggtgatgatgttagattgatcggagaaatatcgacgaatcgattattgagattggat
agtcgtggcggcagtggaagacagaaactgcaaaaaactgttggccttgttcatttaaag
atttcatcatttcgtgagagcaagtccgacgataagcggttttacatatttactgctact
aagacacttcatctgagaactgattcaaagagagatagagtggcttggatacgagcactg
gtctcaactagcagcctttttccatcaagatcgctaaatgatagtatctcccttgttcca
aatgatttgtctatctcaactgacaggcttaagaaacgtttacttgaagacggtatcaat
gagaacatcgtaaaggattgcgagcagataatgctatccgagttttctgagatacaagta
caagttaaagttctttgtgaagaacggtccaatttgctagacacattaaggcaattggag
gcagctaatattgaaaatgaaacctcaggaattccagatggcgaatatcaattgacaaag
catgaattttcgagtttagggcgtggaaaatatagtgaatatagcacaactgagtcatct
gatgatattgagaaacaagagcttgaggaagtgtcagacgaagatggaacctccttttat
gacacaaaagaatattttactgaactggctgtcagtggtttgtcaatgacagaagtttca
aagtactctgagaaggataggagatttaatcagcttgataatgaagagaaaatgaatgct
gagaagcgagtttgcagttctggatatccaaatattgaaaggcgaaaaaagcttcctgac
ccggttgagaaagagaaaggagtcagtctttggtctatgatcaaagacaatgtggggaag
gatctcacacgagtctgtctccctgtttactttaatgaaccaatatcctctcttcagaag
tgctttgaggacttggagtactcttatcttttggacagagcctatgaatatggaaaagca
gggaacagcgacctaaggatcctaaatgttgccgcatttgctgtctctggatatgcttcc
tctgaaggccggcactgtaaacccttcaatcctttgctaggagaaacttatgaagctgac
tttcctgataaaggagttcgtttcttctctgaaaaggttagtcaccacccaactctcatt
gcctgccactgtgaaggtagagggtggaagttctggggtgacagcaacctccgcacaaaa
ttttgggggcggtcgattcagcttgaccctgttggaatcctgaccctagaatttgatgat
ggtgaaatattccagtggagcaaggtcacaacaacaatctataatcttatccttggtaaa
ttgtattgtggtcaccatgggatgatgcatatacaaggaaatcgacagtattcatgcaaa
ctgaagttcaaagaacaatctattcttgacagaaatcctcaccaggttcaagggttcgtt
gaagatgcttctggtaacaaagttgcttcattatttgggaagtgggatgacagcatgtat
tatactactggggatgagactggcaagccaaaggatcggattccctcatctaatgccacc
ttgctttggaaaaggaacaagccacctcttaatctcacccggtacaacttgacgacattt
gctatcacactaaacgaattgacgccaggactccagattaaggagaggctcccacccacg
gattccaggcttagaccagaccagcggcatttggagaatggggaatatgagaaagcaaat
gcagagaaacaacggctggagaggaggcaaagaatgtcaaggaaattacaagaacatgga
tggaagcccagatggttccaaaaggaaggtgataatggatctttccgctatgggggtggc
tattgggaagctcgggagcagggaaattgggatggatgtccaaatatttttggtgaattc
aatgaagacctagtggaatcctctgaagggccctga
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