Populus trichocarpa (black cottonwood): 7458238
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Entry
7458238 CDS
T01077
Name
(RefSeq) protein SLOW WALKER 1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7458238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7458238
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
7458238
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
NBCH_WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
7458238
NCBI-ProteinID:
XP_024449805
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Position
2:19726525..19728611
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AA seq
534 aa
AA seq
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MADLLVEQPREITISKTFPTKPKLKPKAKTPSKTPESKYWSSFKSHQISNLISSIPSIDF
SPISPHQFAATNSASLTLFSSQTLSPTSTISFSDVVTSCSFRCDGSLIAASDLSGLIRVF
DVKTRTPLRRLKSHTRPVRFVKYPLLDKLHLVSGGDDSVVKYWDVAGESVVSDLYGHRDY
ARCGDCSPINGEIFVTGSYDHTVKLWDVRVDSKESVIEVNHGKPVEDVIFLPSGGMVATA
GGNSLKIWDLIGGGKMVYSMESHNKTVTSICVGKVGKESGEEALQYRILSVALDGYMKVF
DYAKMKVTHSMRFPAPLMSIGFSPDCMTRVIGSSNGIIFAGRRKGKEDVGESKSGNFWAL
GSVEEPQRRALRPTYFRYFHRSQGEKPNEGDHLIMRPKKVKLSEHDKLLKKFRHKEALVS
VLSGKNPENVVAVMEEMVARRKLLKCVVNLDEEELGLLLGFLHKHSTMPRHSGLLMGLTK
KVLEMRADDIRASDALKSHIRNLKRSVEEEIRIQHSLQEIQGIISPLLRIAGRR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccttcttgtagaacaaccccgagaaatcaccatctctaaaaccttccctaca
aaaccaaagctaaaacccaaagctaaaaccccatcgaaaacccctgaatccaaatactgg
tcttccttcaaatcccaccaaatttcaaacctcatctcctccatcccttccattgatttc
tcacctatatccccacaccaatttgccgccaccaattccgcctccctcactctcttctcc
tcccaaacgctctctcccacctccaccatctccttctccgatgttgtcacctcctgctcc
ttccgctgcgacggctccctgatcgctgcctcagatctctccggccttattcgggtattc
gatgtaaagacacgaacccctcttcgtcgcctgaagtcccatacgcgccctgttcgtttt
gttaagtacccgttactcgataagctacatttggtgtctggtggtgatgattctgttgtt
aaatactgggatgttgctggagagagtgtggtttcggacttgtatggtcacagggactat
gcgaggtgtggtgattgctctccgattaatggagagatatttgttactgggtcttatgat
cacactgtaaagctgtgggatgtgagggttgatagtaaggaatcagttatcgaagtgaat
catggaaagccagttgaggatgtgatttttttgccctcaggcggaatggttgcgactgca
ggagggaatagtttgaagatatgggatttgattggaggagggaagatggtttattcgatg
gagagtcataacaagactgttacttctatttgtgtagggaaagtagggaaagagagtgga
gaggaggctttgcagtataggattttgagtgtggctttagatgggtatatgaaggttttt
gattatgcaaaaatgaaggttactcattccatgaggtttcctgccccgcttatgtccatt
gggttttctccggattgtatgactagggtcattgggtcttccaatgggattatatttgct
gggaggagaaaaggaaaggaggatgtgggagagagtaaatcagggaatttttgggcgcta
ggcagtgtagaggaaccacagaggcgggctttgaggccaacatattttaggtattttcat
aggagtcaaggggagaagccaaatgagggggatcatttgataatgaggccaaagaaggtg
aaattgtcggagcatgataagttgttgaagaagtttaggcataaagaagcgctggtttca
gttttgagtgggaagaatccagagaatgtggtggctgtgatggaggaaatggtggcaagg
aggaagttattgaaatgcgttgtgaatttggatgaggaggagcttgggttgttgttgggt
ttcttgcataagcactcaactatgccaagacattcaggtttattgatgggcttgactaaa
aaggtacttgaaatgcgggctgatgatattagagcttctgatgctttgaaaagtcatatt
agaaaccttaaaaggtcagttgaagaggagatcagaattcaacattcactacaagagata
cagggtataatttctcctttattgagaattgccgggagaagatag
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