Populus trichocarpa (black cottonwood): 7458240
Help
Entry
7458240 CDS
T01077
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7458240
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
7458240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RRM_5
Motif
Other DBs
NCBI-GeneID:
7458240
NCBI-ProteinID:
XP_024450181
LinkDB
All DBs
Position
2:complement(19798970..19803205)
Genome browser
AA seq
414 aa
AA seq
DB search
MAEGEKEKKSSSSNNEESVKLFVGQVPKHMTEDEVLAMFKEFALVDEVNIIKDKTTRASR
GCCFLICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSE
AELSDLFSKYGIIKDLQILRGSQQTSKGCAFLKYETKEQAHAALEDINGKHKMEGSSVPL
VVKWADTEKERQARRAQKAQSQAMPNTDSQHPSLFGALPMGYAPPYNGYGYQAPGAYELV
PYRLRGGIRPDLSLNISPRNYAPAGYMGSAYPTMPGLQYPIAYPGAIMSHRPLSNSPGTL
SPTVPSCNSATSSGASGSSGGQVEGPPGANLFIYHIPQEFGDQELANTFQAFGQVLSAKV
FVDKATCVSKCFGFVSYDSPAAAQNAITMMNGCQLGGKMLKVQLKKDNKQSKPY
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggtgaaaaggagaagaaatcaagcagcagcaataatgaggagagcgtgaag
ctatttgtaggtcaagtaccaaagcacatgacagaagatgaggttctggcaatgttcaaa
gagttcgctttggtggacgaagtcaacatcattaaagacaagaccactcgcgcttcccga
ggttgttgttttctaatatgtccttccagacaagaagcagataaggctgttaatgcttgt
cataataagaaaacgttgcccggggcatctagtcctttgcaagtgaagtatgcagatgga
gagctggaaaggctagaacacaaactatttgttggtatgcttccaaaaaatgtttctgaa
gctgaattgtccgatttattctctaaatatggaattataaaggacttacaaatactaaga
ggttctcaacaaacaagcaaaggctgtgcttttttgaagtatgagacaaaagaacaagcc
catgctgccctggaggacatcaatggaaaacataaaatggagggttcaagtgttcctttg
gttgtcaaatgggcagatacagaaaaggaaaggcaggctcggagggcccagaaagcacaa
tctcaagctatgcccaatactgattcacaacatccatcattatttggtgccttgccaatg
ggatatgctcccccttataatggatatggataccaggctcctggagcttatgaacttgtg
ccataccgtctgcgtggtgggatcagacctgacctttcactcaatatttcccctagaaat
tatgctcctgctggttatatgggctctgcttatcctacgatgccaggtcttcagtatcca
attgcatatcctggagcaataatgagtcaccgacctttgagtaactctcctggtacatta
tcacccacagttccgagctgtaattctgcaacatcttcaggtgccagtggaagttctggg
ggtcaagtggaaggtccacctggtgctaatttattcatatatcatatacctcaagaattc
ggtgaccaagagcttgccaatacttttcaagcatttggtcaggtcttaagtgccaaggtc
tttgttgataaagcaacttgtgttagcaaatgtttcggatttgtgagttatgactcacca
gctgcagctcaaaatgccattaccatgatgaatggatgccaattgggtggtaagatgttg
aaggttcagcttaagaaagacaataaacagagcaaaccttattga
DBGET
integrated database retrieval system
