KEGG   Populus trichocarpa (black cottonwood): 7458440
Entry
7458440           CDS       T01077                                 
Name
(RefSeq) lariat debranching enzyme
  KO
K18328  lariat debranching enzyme [EC:3.1.-.-]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pop03041]
    7458440
   03009 Ribosome biogenesis [BR:pop03009]
    7458440
Spliceosome [BR:pop03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    7458440
Ribosome biogenesis [BR:pop03009]
 Eukaryotic type
  90S particles
   RNase
    7458440
SSDB
Motif
Pfam: DBR1 Metallophos Metallophos_2
Other DBs
NCBI-GeneID: 7458440
NCBI-ProteinID: XP_024445305
LinkDB
Position
18:1071240..1076247
AA seq 419 aa
MKIAIEGCMHGDLDKVYQTLKLIESQNGTKIDLLLCCGDFQAVRNERDMESLNVPLKYRE
MKSFWKYYSGREIAPVPTIFIGGNHEASNYLWELCYGGYAAPNIYFLGFAGVIKFGNIRI
GGLSGIYNARNYRTGHHERAPYNESSIRSVYHVREYDVHKLMQVEEPIDIFLSHDWPVGI
TDCGNWKQLVRYKPHFEKEIQEKSLGSKAAAQLLEKLRPAYWFSAHLHCKFAAVVQHGEG
GPLTKFLALDKCLPRRKFLQVIEIESEPGPYEIQYDEEWLAITRKFNSIFPLTFKNANFG
ATQLEMEDCRQFVSSRLQERGTKPFEFTQTAPPFDPTQSGPNGSFSGCPRNPQTESLLQL
LELPYLLDSTSESREGRYSPSASQLIQRGSFVHNSEEIPIDDVDESELEEADDVDTRKE
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaagatagcaatagaaggatgcatgcatggcgacctagacaaagtctaccaaacactc
aaactcatcgaatctcaaaacggaaccaagatcgacctcctcctctgctgcggcgatttt
caggcagtgagaaacgagagagacatggagagcttgaacgtgccgttaaaatatcgggag
atgaagtcgttttggaagtactattcaggccgagaaattgctcccgttcctacgatattt
atcggtggaaatcatgaagcttctaattacttatgggaattgtgttatggaggatatgcg
gcgcctaatatatattttttgggatttgctggtgtgattaagtttgggaatattagaatt
ggtggactttccggtatttataatgcacgtaattatcgtacaggacatcatgagagggcg
ccatacaatgagagcagtataagatcagtgtatcatgttcgtgagtatgatgtgcataaa
ctgatgcaagttgaggaaccgattgatatttttctttcacatgattggcctgttgggata
actgattgtgggaattggaagcagcttgttcggtataaacctcattttgagaaagagatt
caagaaaaatctcttggaagtaaagctgctgctcaactgctggaaaaattgagacctgca
tattggttttctgctcatctgcactgcaaatttgccgctgttgttcagcatggtgaaggt
ggccccttgacaaaatttcttgcacttgacaagtgtcttccgcgtcgcaaatttttacag
gttattgaaatagaatcggaacctggaccttatgaaattcaatatgatgaagaatggctg
gccataacaaggaagttcaactctatctttccattaacgtttaaaaatgcaaattttggg
gctacgcagcttgaaatggaagattgtcggcaatttgtcagtagcaggctacaagaaaga
gggaccaaaccatttgaatttacacagactgctccaccttttgatcccactcaatcaggc
ccaaatggttccttttctggatgtccaaggaatcctcaaacagaatcattgttgcagctt
ctggaacttccatatcttttggacagcacatcagaatcaagagaaggaagatatagtcct
agtgcttcccagttaattcagagaggttcttttgttcataatagtgaagaaattcctatt
gatgatgtggatgaatcagaacttgaagaagctgatgatgtggacactagaaaagagtag

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