Populus trichocarpa (black cottonwood): 7458440
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Entry
7458440 CDS
T01077
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7458440
03009 Ribosome biogenesis [BR:
pop03009
]
7458440
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
7458440
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
90S particles
RNase
7458440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
7458440
NCBI-ProteinID:
XP_024445305
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All DBs
Position
18:1071240..1076247
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AA seq
419 aa
AA seq
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MKIAIEGCMHGDLDKVYQTLKLIESQNGTKIDLLLCCGDFQAVRNERDMESLNVPLKYRE
MKSFWKYYSGREIAPVPTIFIGGNHEASNYLWELCYGGYAAPNIYFLGFAGVIKFGNIRI
GGLSGIYNARNYRTGHHERAPYNESSIRSVYHVREYDVHKLMQVEEPIDIFLSHDWPVGI
TDCGNWKQLVRYKPHFEKEIQEKSLGSKAAAQLLEKLRPAYWFSAHLHCKFAAVVQHGEG
GPLTKFLALDKCLPRRKFLQVIEIESEPGPYEIQYDEEWLAITRKFNSIFPLTFKNANFG
ATQLEMEDCRQFVSSRLQERGTKPFEFTQTAPPFDPTQSGPNGSFSGCPRNPQTESLLQL
LELPYLLDSTSESREGRYSPSASQLIQRGSFVHNSEEIPIDDVDESELEEADDVDTRKE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagcaatagaaggatgcatgcatggcgacctagacaaagtctaccaaacactc
aaactcatcgaatctcaaaacggaaccaagatcgacctcctcctctgctgcggcgatttt
caggcagtgagaaacgagagagacatggagagcttgaacgtgccgttaaaatatcgggag
atgaagtcgttttggaagtactattcaggccgagaaattgctcccgttcctacgatattt
atcggtggaaatcatgaagcttctaattacttatgggaattgtgttatggaggatatgcg
gcgcctaatatatattttttgggatttgctggtgtgattaagtttgggaatattagaatt
ggtggactttccggtatttataatgcacgtaattatcgtacaggacatcatgagagggcg
ccatacaatgagagcagtataagatcagtgtatcatgttcgtgagtatgatgtgcataaa
ctgatgcaagttgaggaaccgattgatatttttctttcacatgattggcctgttgggata
actgattgtgggaattggaagcagcttgttcggtataaacctcattttgagaaagagatt
caagaaaaatctcttggaagtaaagctgctgctcaactgctggaaaaattgagacctgca
tattggttttctgctcatctgcactgcaaatttgccgctgttgttcagcatggtgaaggt
ggccccttgacaaaatttcttgcacttgacaagtgtcttccgcgtcgcaaatttttacag
gttattgaaatagaatcggaacctggaccttatgaaattcaatatgatgaagaatggctg
gccataacaaggaagttcaactctatctttccattaacgtttaaaaatgcaaattttggg
gctacgcagcttgaaatggaagattgtcggcaatttgtcagtagcaggctacaagaaaga
gggaccaaaccatttgaatttacacagactgctccaccttttgatcccactcaatcaggc
ccaaatggttccttttctggatgtccaaggaatcctcaaacagaatcattgttgcagctt
ctggaacttccatatcttttggacagcacatcagaatcaagagaaggaagatatagtcct
agtgcttcccagttaattcagagaggttcttttgttcataatagtgaagaaattcctatt
gatgatgtggatgaatcagaacttgaagaagctgatgatgtggacactagaaaagagtag
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