Populus trichocarpa (black cottonwood): 7458466
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Entry
7458466 CDS
T01077
Name
(RefSeq) farnesyl pyrophosphate synthase 1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00900
Terpenoid backbone biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
7458466
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pop01006
]
7458466
Enzymes [BR:
pop01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
7458466
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
7458466
Prenyltransferases [BR:
pop01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
7458466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
7458466
NCBI-ProteinID:
XP_002308751
UniProt:
A9PFL3
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All DBs
Position
6:complement(274913..278853)
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AA seq
342 aa
AA seq
DB search
MADLKSTFLNVYSVLKKELLEDPAFEWSPDSRDWVDRMLDYNVPGGKLNRGLSVIDSYKY
LKEGKELTEDEIFLTSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGLIAAN
DGILLRNHIPRILKNHFRDKAYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTL
SLHRRIVQYKTAYYSFYLPVACALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFGA
PETIGKIGTDIEDFKCSWLVVKALEICNEEQKKLLHENYGKADPANVAKVKALYHELNLQ
GVFADYESKSYEKLIASIEAHPSKAVQAVLKSFLAKIYKRQK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcagatctgaagtcaacgttcttgaatgtctactctgttctcaagaaagagcttctt
gaggatcctgctttcgaatggagtcctgattctcgtgattgggttgataggatgttggac
tacaatgtgcctggagggaagctaaatcgaggactatctgtgattgacagctacaaatac
ttgaaagaaggaaaggaattaacggaagatgaaatctttctcacaagtgctcttggttgg
tgtattgaatggcttcaagcatattttcttgttcttgatgacattatggatagttcccat
acaaggcgtggtcaaccctgctggtttaggttgcccaaggttggtcttattgcagcaaat
gatgggattctgcttcgcaatcacatccctagaattctcaaaaaccacttcagagacaag
gcatactatgtagatctcctcgacttgttcaatgaggttgagtttcaaacagcctctgga
cagatgatagatctgattacaacactcgaaggagaaaaggacttgtccaagtacactttg
tctctacaccggcgaattgtgcagtacaagaccgcctactactcattttaccttcctgtt
gcatgtgcattgctcatggcgggtgagaatctggacaaccatgttgatgtaaagaatatt
cttgttgagatgggaacttacttccaagtacaggatgattacttggattgctttggtgct
ccagagacaattggcaagataggaacagatattgaagatttcaagtgctcttggttggtt
gtgaaggctttggagatttgcaacgaagagcaaaagaaactattacatgaaaactatggg
aaagctgacccggcaaatgtagcaaaagtgaaggccctctatcatgagctgaaccttcag
ggtgtatttgcggactatgagagcaaaagctatgagaaactgatagcttctatcgaagct
caccctagcaaagcagtgcaagcagtgttgaagtccttcttggctaaaatttacaagagg
cagaaatag
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