Populus trichocarpa (black cottonwood): 7458472
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Entry
7458472 CDS
T01077
Name
(RefSeq) nuclear transcription factor Y subunit B-1
KO
K08065
nuclear transcription Y subunit beta
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7458472
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
7458472
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GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
TFIID-18kDa
Bromo_TP
CENP-T_C
DUF4548
TAF
Motif
Other DBs
NCBI-GeneID:
7458472
NCBI-ProteinID:
XP_052310205
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All DBs
Position
6:complement(367445..368870)
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AA seq
228 aa
AA seq
DB search
MDRRGGFHGYRKLLNTSSEINMRLTAEINHNSSSNSNVHVTTDDINECTVREQDRFMPIA
NVIRIMRKILPSHAKISDDAKETIQECVSEYISFITSEANERCQREQRKTITAEDVLYAM
SKLGFDDYIEPLTIYLHRYRELEGERSSMRCEPLVKSTRNNNNNVDQFGAMAGVGAYAPA
FHVSHHHHGFFGGSPIGAGYMNTRDATPNASSSHAAALANVEAFAQHK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtagaggaggctttcatgggtaccgcaagctcctcaacacaagctcagagatc
aacatgaggctaactgctgagatcaaccacaacagcagcagcaacagcaacgttcatgta
accacagatgacattaatgaatgtactgtaagagagcaagacaggttcatgccaatagcc
aatgttatcaggatcatgcgcaagattctcccttcacatgcaaaaatatctgatgatgcc
aaagaaacaatccaagaatgcgtatctgagtacattagcttcatcactagtgaagccaat
gaacgttgccaacgcgagcaacgcaagactataacagctgaggatgtgctttatgcaatg
agcaagctagggtttgatgactacattgaacccttgaccatctatcttcaccgataccgt
gaactcgagggcgagcgcagctcgatgagatgtgagccattggtgaagagtactaggaat
aacaataacaatgttgatcagtttggagcaatggctggggttggtgcttatgcaccagca
tttcatgtgagccatcatcaccatgggttctttggtgggtctcctataggagctggatat
atgaatacgagggatgctacccccaatgctagttcctcccatgctgctgctttggctaat
gttgaagcatttgctcagcataaatga
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