Populus trichocarpa (black cottonwood): 7458487
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Entry
7458487 CDS
T01077
Name
(RefSeq) proteasome subunit alpha type-4
KO
K02728
20S proteasome subunit alpha 3 [EC:
3.4.25.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7458487
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7458487
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7458487
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
7458487
Peptidases and inhibitors [BR:
pop01002
]
Threonine peptidases
Family T1: proteasome family
7458487
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
7458487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
DUF3842
Motif
Other DBs
NCBI-GeneID:
7458487
NCBI-ProteinID:
XP_002307867
UniProt:
A9PCM5
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All DBs
Position
6:604347..607104
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AA seq
250 aa
AA seq
DB search
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST
STEKMYKIDDHVACAVAGIMSDANILINTARIQAQRYTFAYQEPMPVEQLVQSLCDTKQG
YTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYSGWKAGAIGANNQAAQSMLKQDYK
DEITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPSGNVKYQVCSPDVLSKLLVKF
GVTQPAAETS
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggagatatgatagccgcacaacaatcttctcccctgaaggacgcctgtatcaa
gttgagtatgctatggaggccattggaaatgctggttctgcaataggaatattatccaaa
gatggggttgtcttggttggagaaaagaaggttacatccaagctattgcaaacctcaact
tccactgagaagatgtacaagattgatgatcatgttgcttgtgctgtggctggaattatg
tctgacgccaacatcctcatcaacactgccaggatccaagcacaacgctacacctttgca
taccaagagccaatgcctgtagagcaactagttcaatccctttgtgatactaagcaaggg
tacacacagtttggaggtcttcggccctttggcgtgtcgtttctgtttgcaggatgggac
aaaaattatggcttccaactttacatgagcgatcctagtggaaattattctggttggaaa
gctggagcaattggtgcaaacaaccaggctgcacaatcaatgctaaagcaggattacaag
gatgaaatcacaagggaagaggctgtccagcttgctttgaaggtgctcagcaaaaccatg
gatagcacaagccttacttcagagaagctcgaactggctgaggtcttcctttctccttct
gggaatgtgaaataccaagtctgctcacccgatgttctaagcaagctgttggtgaagttt
ggagttacccaacctgctgctgagacttcctga
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integrated database retrieval system