Populus trichocarpa (black cottonwood): 7458896
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Entry
7458896 CDS
T01077
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a isoform X1
KO
K14972
PAX-interacting protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7458896
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
7458896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIX_2
Med15_C
KIX
Motif
Other DBs
NCBI-GeneID:
7458896
NCBI-ProteinID:
XP_002322595
LinkDB
All DBs
Position
16:1565411..1572535
Genome browser
AA seq
1004 aa
AA seq
DB search
MMEDKSFKGLKVEGMTSQRQDWRAELTSEVRKKVVEKILGNLKDHYKMQASSDPEFLNRL
RNIAVQFEDKTFRNSATQGSYAYTIGKKMGSFGTIKSEASQTTGKNPSGLGQTSIVNDVG
QSSETNAIAQFSQYLVGNNLVEQNMQPNMSPDFQSEVPGSQSSDQKLMYQLQQQEFQDQI
LKDKVQNISKRFAIQPDIHNRQPHQRQKHVTSQTSQNLYSQPPSASPQYQQSSFSQPSNS
TMFQQNQQLRQQHDASEQRQWSMPQQNVLPSFQQPLGQQRDVSEIQHQQKMAGPQSIILN
SQLHQSSSHMIQQQGVTASEQKVQKITQPVQSHQILGSQKQSGLSQEGIQPRPQTSASFH
QQRSIADQQKLFQSHRSFAGSSSASAEPKSSNQLANTADGHDADYQKLQDFKQQYRPQME
YIYKNLKSLLDKETDPDQAMRYMKQVIWIEKNMPIFSLQRNQMANASKEKLQMAQQAIIK
FVNYFRKKSSASVEQQADLCLQNSGQSQISQPPLNWNEKLQFHPVNLTMTNGLGSSSLTS
SMQSGFLNSRPSFFSSLQYSSGMDLEQRNGPSMVQQPARKTGIISSNNIVNAFDSPFAHQ
TTLTQNLEQQMQKQNIQHKKEQMLIRNSQKSGSPAMESPENLHLPLISTTIHQPHSSSPR
KSQLSSARMDQQTFPLASPASTPLTSTSEYVAFNQVDSQTQSHNQSTASGTPGISASPLL
EEYTSSPNTSDTNQPLQRLLQAVKSLSPDVLSAAVHDIDSVVNVVDKIAGGSAERHSKGA
IGEDLVSETIFHVQERNFALQHLSMKDKEMEHQSNAMASDTIGQPMDWISDFDSTATSRF
NKLRTEPRNDLLNEIRHVNKLLVETTVDVDSTEDDSLPEASAGTIIKCSYTAVAVSGDFK
SLSSSPMFPELTLRLLVPAEFPNSSPIILDKLPSGLSDELEDLSEKTKLRFSVALRNLSE
PMSLLEIARTWDACARAVLLEHVKPLGGECFSSRYGTWENCLTA
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaagttttaagggtttaaaagttgaagggatgacaagtcaaagacag
gattggagagcggaattgacatctgaagtcagaaagaaagttgtcgaaaagatactggga
aacttgaaagaccactacaagatgcaggcttcttctgatcctgaatttctaaatcggcta
aggaacattgctgtgcaatttgaagataagacattcagaaattcagcaacacagggaagt
tatgcttatacaataggtaagaagatgggctcatttggtaccataaagtctgaagcttcc
cagacaacaggtaaaaatccctcaggtctaggtcagacctcaattgtaaatgatgttggt
caaagctcggagacaaatgctatagcacaattttcccaatatttggttggtaataatttg
gttgaacaaaatatgcaaccaaatatgtctcctgattttcagagtgaagtaccaggaagc
cagtcttcagatcagaagctgatgtaccagttacaacagcaggagtttcaggatcaaatt
ctgaaggataaggtccagaatattagtaagaggttcgccatccaacctgacattcataac
cgccaacctcatcagcggcagaagcatgttacatcacagacttctcagaatctatattct
cagccaccatcagcatcaccacaataccagcaatcatcattttcacagccatcaaatagc
acaatgtttcaacagaatcaacaactcaggcagcagcatgatgcttcagagcagcgacag
tggtcgatgccccaacaaaacgttttaccatcattccagcagcccctaggccaacaacga
gatgtttctgaaattcagcatcagcaaaaaatggctggaccacaatcaattatcttgaat
tcgcaattgcatcagagttcaagccacatgattcaacaacaaggggttacggcttctgaa
cagaaagtccagaaaatcacacagccagttcagtcgcatcagattctgggttctcaaaaa
caaagtggcttgtcgcaagaagggatccaaccaagacctcaaacttcagcttcctttcat
cagcagaggagtattgctgatcagcagaagctttttcagtcacataggtcatttgccggg
tcctcatcagcatcagcagagccaaaatcatcaaaccaacttgccaatacagcggatggg
catgatgcggactatcaaaagcttcaagactttaaacaacagtataggccacaaatggaa
tacatatacaaaaatttgaagtccctacttgacaaggaaacagatccagatcaagctatg
aggtacatgaagcaagtgatttggatagaaaaaaacatgccgattttttcattacagcgg
aatcagatggcaaatgcttccaaggagaagttgcagatggctcagcaagctattattaag
tttgtgaactactttcggaagaagagctctgcctctgttgagcaacaagcagacctttgt
ctgcagaacagtggtcaatcccaaatatctcagcctcctctaaactggaatgagaaactc
cagtttcatccagtgaatttaactatgacaaatggtttgggcagttcatctctcacatct
tcgatgcagtcagggtttctaaattcacgacccagtttcttcagctcacttcaatatagt
tctggaatggatttggaacaaaggaatggacctagtatggttcagcagcctgcaaggaaa
acaggcataatatctagcaataacattgtgaatgctttcgattctccgtttgctcatcag
acaacgctgacacagaacctcgagcagcaaatgcagaaacaaaatattcagcacaaaaag
gaacagatgctgatccgtaacagccaaaaaagtggctctccagctatggaatctccagaa
aatctgcatttaccactgatatcaacaactatacatcaaccacactccagttctcctcga
aaatctcagctctcttctgctcgtatggaccagcaaacttttcctttagcttctcccgct
tctactcccttgacttcaacatcagaatatgtcgcctttaaccaagttgatagccagaca
caaagtcacaatcaatctactgcaagcggcacacctgggatatcagcctcccctttactc
gaagagtatactagctcccccaacacatctgacacaaaccaaccactccagcgtttactt
caagctgtaaaatcactatcaccagatgtattaagtgctgctgtccatgatattgactca
gttgtcaatgtggtcgataagattgctggcggatcagctgaaagacactccaagggtgct
attggtgaggatttggtgtctgaaacaatattccatgtacaagaaaggaactttgcctta
caacatttaagcatgaaagacaaagagatggagcaccagtctaatgcaatggcctcagac
acgatcgggcagccaatggattggatatctgattttgattcaactgcaacatctaggttc
aataagctgagaaccgagccgaggaacgatctgttgaacgaaatcagacatgtaaacaag
ctgttagtcgaaactactgtagatgttgattcaacagaagatgattctttacctgaagct
agtgcaggaaccattatcaaatgttcctatacggctgtggccgtcagtggagattttaaa
tcattatcttcatctcccatgtttccagaacttaccttgcgcttgctcgttcctgccgaa
tttccaaattcttctccaattatcttagataagttaccttctggtttgagtgacgagcta
gaagatttgtcggagaagacaaaattgagattcagcgtagctcttcggaacctttcagag
cccatgtctcttctggagatagcaaggacttgggatgcttgtgctagagctgtgctttta
gagcatgttaaaccactcggaggagaatgctttagttcaagatatggcacatgggagaat
tgtctaactgcataa
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