KEGG   Populus trichocarpa (black cottonwood): 7459020
Entry
7459020           CDS       T01077                                 
Name
(RefSeq) transcription factor HY5 isoform X1
  KO
K16241  transcription factor HY5
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:pop00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    7459020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pop03000]
    7459020
Transcription factors [BR:pop03000]
 Eukaryotic type
  Basic leucine zipper (bZIP)
   Plant bZIP factors
    7459020
SSDB
Motif
Pfam: bZIP_1 bZIP_2 bZIP_Maf Gal4_dimer ATF7IP_BD GAS SHE3 FlaC_arch DUF1192 GIT_CC Phlebovirus_NSM DUF3563 DMPK_coil TSC22 DUF7310 TMCO5 Mei4 Herpes_BLRF2 Uso1_p115_C GrpE APG6_N DUF7365 Nnf1 CENPH FmiP_Thoc5 V_ATPase_I Macoilin
Other DBs
NCBI-GeneID: 7459020
NCBI-ProteinID: XP_002324289
UniProt: B9IKV5
LinkDB
Position
18:complement(2186160..2189103)
AA seq 168 aa
MQEQTTSSIPANSLPSSSERSSSSAPQLEVKEGMESDEEIRRVPEMSGEPAGTSASGRET
GSNAGPDRVQPTGEGQSQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLTELETR
VKDLEKKNSELEERLSTLQNENQMLRQILKNTTASRKGGSSGTNADGS
NT seq 507 nt   +upstreamnt  +downstreamnt
atgcaagaacaaacaactagttcaattcctgctaattctctgccgtctagcagtgagcga
tcttcaagttctgctcctcaacttgaagtcaaagaaggtatggagagtgatgaggaaatt
agaagagttccagagatgagcggcgagccggccggtacatcagcctccggtagagagacc
ggttcaaacgccggtccagaccgggtgcagccaacaggagagggccaaagtcagagaaag
agaggaaggagcccagctgacaaagaaaacaaaaggctgaagaggttgctgaggaataga
gtgtcagcacagcaagcaagggagaggaagaaggcttacttgactgagttggaaacaaga
gttaaagatttggaaaagaagaattctgagcttgaagagaggctttctactttgcagaat
gagaatcaaatgcttagacaaatattgaagaacacaacagcgagcaggaaaggaggcagc
agcggtactaatgcagatgggtcttag

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