Populus trichocarpa (black cottonwood): 7459031
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Entry
7459031 CDS
T01077
Name
(RefSeq) chloride channel protein CLC-d isoform X2
KO
K05016
chloride channel 7
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7459031
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7459031
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
7459031
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
7459031
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
7459031
Ion channels [BR:
pop04040
]
Chloride channels
Chloride channel (CLC)
7459031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
7459031
NCBI-ProteinID:
XP_002315783
LinkDB
All DBs
Position
10:complement(11514125..11522589)
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AA seq
771 aa
AA seq
DB search
MLSNQLHNGMETAKLLWSRIPSSEDGEVDGVSMLRTSNGNTAESLDYEVIENQAYRYEQA
QRGKLYVGYQVVVKWFLALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQRSYFAGFV
IYVLINLVLVFSSVYIVTHFAPAAAGSGIPEIKGYLNGLDIPGILLFRTLIGKIFGSIGS
VGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLSLRWLQVFKSDRDRRDLVTCGCAAGV
AAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKSGKCGHFGSGG
FIIWDTSDGQEDYSFGELLPMAVIGVIGGLLGALFNQLTLHITYWRRNYLHKNGNRVKII
EACLISVITSAISFGLPLLRKCNPCPESDPDSGIECPRPPGMYGNYVNFYCGKDKEYNDL
ATIFFNTQDDAIRNLFSAKTIHEFSAQSLLTFLVMFYTLAVVTFGTAVPAGQFVPGIMIG
STYGRLVGMFVVNFYKVNVEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLI
MLVLLISKAVGDAFNEGLYEQQARLRGIPLLESRPKYQMRNMKAKEACGNQKVVSFPRIV
KVADVISILQSNIHNGFPVIDHTRNGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCDPAG
VSKSIRHNFSEFVKPVSSKGISIEDIHLSSDDLEMYIDLAPFLNPSPYVVPEDMSLTKVY
NLFRQLGLRHIFVVPRASRVVGMITRKDLLIEDREDSANVELQSTSRAPSI
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgaatcaattgcataatggaatggagactgcgaagctattgtggtctcggatt
ccaagctcagaggacggtgaggttgacggtgttagcatgttgagaaccagcaatggaaac
actgctgagagtcttgactatgaagttatcgagaatcaggcgtatcgatatgaacaggcg
caaagagggaagctttatgttggatatcaagtggtagttaagtggttcttagctttgctc
attggtattggtactggattagcggctgttttcatcaatatatctgtcgagaattttgca
ggctggaagttttctttgacgttttcaataattcagagatcatattttgctggatttgta
atatatgtattaattaacttggttttagtcttttcatctgtatatatcgttacacatttt
gcacctgcggcagcaggttctggtattccagaaattaagggttatttgaatgggcttgat
attcctggtattctactcttcagaactttgattggaaagatatttggaagcattggttct
gtgggaggtggccttgctttaggaaaagaaggtcctcttgttcatactggtgcttgtatt
gcttccttgcttggacaaggtggatctacaaaatatcatctaagtttgaggtggcttcaa
gttttcaagagtgatcgcgatcgtcgtgatcttgtgacctgtgggtgtgcggctggtgtt
gctgctgcttttagagctcctgttggtggtgtattatttgctttggaagaagttacatcc
tggtggaggagtcaacttatgtggcgtgtcttttttacctctgctgttgtggcggttgtg
gtgcgtactgctatgggatggtgtaagagtgggaagtgtgggcattttggctctggtggt
ttcataatatgggacacgtcagatggtcaagaggactattcttttggggagttacttcca
atggcagttattggggttattggtggtctacttggtgcgttattcaatcagcttactctt
catataacctactggcgacggaattatctgcacaagaatgggaaccgagtgaagattatt
gaagcatgcctcatctctgttattacttcagctatttcctttggactaccacttctaaga
aaatgcaatccatgccctgaatcagatcctgactctggcattgaatgcccaaggccccca
gggatgtatggaaattatgtaaatttttactgtggcaaggacaaggaatacaatgatctt
gcaacgattttctttaatactcaggatgatgccataaggaatctgtttagtgcaaagaca
atccatgagttcagtgcccagagtttattgacgtttctggttatgttttatactttagca
gtggtgacatttggtactgcagttcctgctggccagtttgttcctggaattatgataggc
tccacgtacgggcgcctggttggcatgtttgttgttaatttttacaaggtcaacgttgag
gagggaacatatgcactgttgggagcagcttcttttcttggaggttcaatgcgaatgact
gtctctttatgtgtaattatggttgagatcacaaacaacttgaaacttttacctttaatc
atgcttgttctcctgatatcaaaggctgttggtgatgcattcaatgaaggtctttatgaa
caacaagcacgattgagaggaattccactgttggaatctagacctaaataccaaatgaga
aacatgaaggcaaaggaagcttgtggaaatcagaaggttgtctcctttccccgtattgtt
aaggttgcagatgtcatttctattttgcagagcaacatacacaatggctttcctgtgatt
gatcacacgagaaatggggaaacacttgtaattggacttgtgcttcgcagtcatttgcta
gtccttctccaatccaaggtggattttcagcatagtcctttaccatgtgatccagcaggt
gtatcgaaatcaatcaggcacaacttcagtgagtttgtgaaacctgtttccagtaaagga
atttctatagaggatattcatttaagttcagatgacttggaaatgtacattgatcttgcc
ccatttttgaacccctctccatacgttgtccctgaagatatgtctttaacaaaggtatat
aatcttttccgacaactagggttgaggcatatatttgttgttcctcgtgcatctcgggta
gttggaatgattacaagaaaggacttgctgattgaggatagagaggattcagctaatgtg
gagctccaatcaactagtagggcaccgtcaatatag
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