Populus trichocarpa (black cottonwood): 7459035
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Entry
7459035 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: ARM REPEAT PROTEIN INTERACTING WITH ABF2
Organism
pop
Populus trichocarpa (black cottonwood)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
BTB
HEAT_2
HEAT
HEAT_EZ
Atx10homo_assoc
ELMO_ARM
KLHL33-like_BTB_POZ
Adaptin_N
FapA
Motif
Other DBs
NCBI-GeneID:
7459035
NCBI-ProteinID:
XP_052312317
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Position
10:11586620..11593317
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AA seq
714 aa
AA seq
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MELKKHQDQRLPERKGQKRKLEEEIEEEQREISAVEEAAAAPYGEARKVILNEVYAQVNI
LNSTFSWDEAHRATAKRATHVLAELAKNEEVVNLIVEGGAVPALVKHLQVPPSSEIDHDN
SKPFEHEVEKGSAFALGLLAVKPEHQQLIVDAGALSHLVSLLKRQRDVHKDGSDSRAVNS
VIRRAADAITNLAHENSSIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDE
NKNQIVECNALPALILMLRSDAAAIHYEAVGVIGNLVHSSPSIKREVLAAGALQPVIGLL
SSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVQPLIEMLQSPDVQLREMSAFALGRL
AQDTHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFSLYGLADNEDNVSDFISVGGVQKL
QDGEFSVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKAVQRRVALALAHLCSPDD
QRAIFINNSGLDLLLGLLGSSSPKQQLDGAIALYRLANKATILSPVDAAPPSPTPQVYLG
EQYVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEV
FELMMRFIYTGSVDVTLGIAQDLLRAADQLKADVINILCLLKDITLENISSMYELSEAFH
AISLRHRCILFILEQFDKLSDKPRHSQLIHRIIPEIRDYFDKALTKPNQHNSRL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaagaagcaccaagatcagaggctccctgagaggaaggggcaaaaaaggaaa
cttgaagaggaaatcgaggaggagcagagagagatctcggcggtggaggaggccgctgca
gctccctacggcgaggcacggaaagtgatattgaacgaggtttatgctcaggttaatatc
ctcaactctaccttctcatgggacgaagctcatcgcgccaccgccaaacgcgctactcac
gtcctcgcagaactcgcaaaaaacgaggaagtagtgaacttgattgttgaaggaggtgca
gttcctgcactggttaagcatcttcaagtaccaccgtcaagtgaaattgatcatgataat
tcgaagccgtttgagcatgaagtcgagaaaggaagtgcttttgcgcttgggctgcttgca
gtcaagccagagcatcagcaactcattgttgacgctggggctttgtcacatcttgtgagc
ttgttgaagaggcaaagggatgttcataaggatggttctgattctcgagctgtgaatagt
gttattaggagggctgctgatgctatcaccaatcttgctcatgagaacagcagcattaaa
actcgtgttaggatggaaggtgggattcctcctctggttgagttgcttgaattcactgac
acaaaggtgcaaagagcagctgctggggcacttagaaccctggcttttaagaatgatgag
aacaagaatcagattgttgaatgcaatgctcttcccgcccttatattaatgttacgatct
gatgctgctgccatacactatgaagcagtaggtgtgattggaaatctggtacattcatcc
ccaagcataaaaagagaagttcttgctgctggggctctccaacctgttattggtttactt
agctcctgctgctctgagagccaaagggaggctgctttattacttggacaatttgcagca
acagattcagattgcaaggtgcacattgtacaaaggggtgctgttcaacctttgatcgag
atgctccagtctcccgatgtccaactgagagaaatgtcagcatttgcattggggaggttg
gcacaggacacacacaaccaagctggtatagcccacaatggtggtctagtgccattactg
aagcttctggattcaaagaatggatctcttcaacataatgctgcattttctctgtatggc
cttgcagataatgaggacaatgtctctgattttatcagtgtgggaggtgttcagaagctg
caggatggagagtttagtgttcaggcaacaaaagattgtgtagccaagactttgaaaaga
ctggaggagaagattcatggaagagttttaaaccacttattgtatctaatgcgtgtagcg
gagaaggctgtccaacgacgtgttgctctagctcttgcacatctttgttccccagatgac
cagagagcaatattcattaataatagtggattggatttactccttgggcttcttggctct
tcaagcccgaagcaacaacttgatggagccatagctctttacaggttggccaacaaagca
acgattctttctcctgtggatgcggctcctccttctccaacaccgcaggtgtatttagga
gagcagtatgtaaacaatgctacattgtcggacgtcacctttctcgtcgaaggtagacga
ttctatgcccacagaatttgcctgcttgcttcctcagatgcatttcgggcaatgtttgat
ggtggttaccgggaaaaggatgcaagggacattgaaattccaaatatcagatgggaggtt
tttgagttgatgatgagattcatatacacaggttcagtagatgttacattaggtatcgca
caggatctcctcagggctgctgaccagttgaaagccgatgtcataaacattttatgtttg
cttaaggatataacattggaaaacatttcaagcatgtatgaactttcggaagctttccat
gctatttcattgaggcacagatgcattttgtttattttggagcagttcgataaattgagt
gataagcccaggcactctcaattaatccaccgtataatacccgagattcgtgattacttt
gacaaagcactcaccaaacctaaccaacataactcgcggctctag
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