Populus trichocarpa (black cottonwood): 7459084
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Entry
7459084 CDS
T01077
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit I-like
KO
K03246
translation initiation factor 3 subunit I
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pop03012
]
7459084
Translation factors [BR:
pop03012
]
Eukaryotic type
Initiation factors
eIF-3
7459084
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
7459084
NCBI-ProteinID:
XP_052312011
UniProt:
A9PCW6
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All DBs
Position
10:complement(12311064..12314933)
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AA seq
326 aa
AA seq
DB search
MRPILMKGHERPLTFLKYNREGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDV
SRDSMLLITASADQSVKLWNVQTGAQLFTFNFNSPARSVDFSVGDKLAVITTDPFMGVTS
AINVKSIAEDPSQQSGESVLTITGPTGRINRAVWGSLNKTIISAGEDSVVRIWDSETGKL
LKESDPEVGHKKPITSLTKSADGSHFLTGSLDKSAKLWDTRTLTLIKTYATERPVNAVTM
SPLLDHVVLGGGQDASSVTTTDHRAGKFEAKFYDKVLQEEIGGVKGHFGPINALAFNPDG
KSFSSGGEDGYVRLHHFDPDYFNIKI
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaatcttgatgaaagggcatgaaaggcccttaacattcctaaaatacaacagg
gaaggagatctcttgttttcttgtgctaaagatcataatcccaccgtctggttcgccgat
aacggcgagcgtttgggcacataccgtggccacaacggagccgtttggtgttgcgatgta
tcaagagattcgatgctgctgattactgctagtgcggatcagtcggtgaagctgtggaat
gttcagactggagcacaattgttcacatttaatttcaattcaccggctcggtctgtcgat
ttttctgttggtgataaacttgctgttattactaccgatcctttcatgggagtcacttct
gccattaatgtcaaaagcatcgcagaagatccttcccagcagagtggtgaatccgtgctc
accatcaccggacctacgggaagaattaacagagctgtttgggggtccctcaacaagact
atcataagtgctggagaggattctgtggtccgcatatgggattccgagactggaaaattg
ttgaaagagtcagacccagaagttgggcataagaagccgataacatcactcacaaaatct
gctgatggttcccacttcctgactggttctctagataaatctgccaagctctgggacacc
agaactttaactcttatcaagacctatgcaacagaacgcccggttaatgctgttacaatg
tctccacttcttgatcatgtcgtgcttggaggtgggcaggatgcatcatctgtcaccaca
actgatcaccgtgctgggaagttcgaagccaaattctacgacaaggttcttcaagaagaa
attggtggtgtgaaaggtcattttggacctataaatgctttggcgttcaaccctgatggg
aaaagtttttcaagtggaggtgaggatggttatgtcaggctgcaccacttcgatccagat
tatttcaacataaagatttag
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