Populus trichocarpa (black cottonwood): 7459166
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Entry
7459166 CDS
T01077
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
KO
K02519
translation initiation factor IF-2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pop03012
]
7459166
03029 Mitochondrial biogenesis [BR:
pop03029
]
7459166
Translation factors [BR:
pop03012
]
Eukaryotic type
Initiation factors
MTIFs
7459166
Prokaryotic type
7459166
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
7459166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
MMR_HSR1
IF2_N
GTP_EFTU_D2
Ras
RsgA_GTPase
MMR_HSR1_Xtn
Roc
Arf
Motif
Other DBs
NCBI-GeneID:
7459166
NCBI-ProteinID:
XP_024439031
LinkDB
All DBs
Position
1:complement(46223331..46231741)
Genome browser
AA seq
1025 aa
AA seq
DB search
MGSMVVLVGSMPSLASLVSLGSLSGSTATSSCVESSSYSVVKRVSLSKRSLRRAKSWHCV
CKYSVTATDFIAEQGNAVSLDSSSNGDGNDGDSGVVLKPSPKPVLKSPAGSKDETLLSMN
SVGWGSSRGSGDSDEEEERNKVIESLDEVLEKAGKLETSKQSQVGASAGSIRKENGNVNK
MTPSNSYTDSRNVNSTAATRKAKTLRSVWRKGDTVSSVQRIVKEVPKASNKFIKEEPKTV
EGTKLESQSRVPLKPPQPPLRPQPKLQAKPSAAPSPIIKKPVVLKDVGAAPKSPIKDETG
SGAAQSKGQPILIDKFARKKPVVDPVIAQAVLAPTKPGKGPAPGKYKDRKKGASPGTPRR
RMMDNDVEIPDEELNVSIPGAATARKGRKWTKASRKAAKIQAARDAAPVKVEILEVGEKG
MSIEELAYNLTMGEGEILGLLFSKGIKPDGVQTLDKEMVKMICKEYEVEVIDADPVRFEE
MAKKNEILDEDDLDKLQERPPVLTIMGHVDHGKTTLLDHIRKSKVAASEAGGITQGIGAY
KVMVPVDGKLQPCVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAK
AAGVPIVIAINKIDKDGANPERVMQELSSIGLMPEDWGGDVPMVQVSALKGENIDDLLET
VMLVAELQELKANPDRNAKGTVIEAGLDKSKGPIATFIVQKGTLKRGDVVVCGEAFGKVR
ALFEGGGKRVDQVGPSIPVQVIGLSNVPIAGDEFEVVASLDIAREKAEARAELLWNERIS
AKAGDGKVTLSSLASAVSAGKLSGLDLHQLNIIMKVDLQGSMEAVRQALQVLPRDNVTLK
FLLQATGDVSNSDVDLAVVSEAIILGFNVKAPGSVKSYAEKKGVEIRLYRVIYELIDEVR
NAMEGLLELVEEQEPIGSTVVRAVFSSGSGRVAGCMVTEGKVIKGCGIRVVRNRKTVHVG
VLDSLRRVKEIVKEVNAGLECGIGAEDYDDWEEGDIIEAFNTVEKKRTLEEASASMAAAM
EEVGL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatggtggttttagtaggtagtatgccatctttggcttcccttgttagttta
ggaagcttgagtgggtctacagctacttctagttgtgttgaatcttcttcgtattcagtt
gtgaagagagtttctttatcaaaaaggagtcttaggagggctaaaagttggcattgtgtg
tgtaaatattcagttactgccactgatttcattgctgagcaaggcaatgctgtatcactt
gattctagtagtaatggtgatggtaatgatggtgatagtggggttgtacttaaacctagt
ccaaagcccgtgttaaaatcgccggctggttccaaggatgaaacccttttgagtatgaat
tctgttgggtggggttcttcaaggggtagtggggattctgatgaggaagaagagaggaat
aaggtgatcgagtcacttgatgaggtcttggagaaggctggaaagcttgaaacttcaaaa
caaagccaagtgggtgcgagtgctggtagtattaggaaagagaatgggaatgtaaataaa
atgacaccatctaattcatatactgattcgagaaatgttaattccacggctgctactcgt
aaagctaaaactttgagaagtgtgtggcggaaaggagacacggtgtcttcagtgcagagg
attgtcaaggaagttccgaaggctagtaacaagtttatcaaggaggaacctaaaacagta
gaagggacaaagctagaatctcaatcacgtgttccactgaaacctcctcagccacctcta
agacctcaaccaaagttacaggccaagccatccgcagctccttcacctatcattaagaaa
cctgttgttttgaaggatgtgggggctgctccaaagtcaccaattaaagatgaaacaggc
tcaggtgctgcacaaagtaaaggacagccaattttgattgacaaatttgctcgcaagaaa
ccggttgtcgatcccgtaattgcacaggctgttttagctcctactaaaccaggaaagggc
cctgctcctgggaagtacaaagaccgaaagaaaggtgcttcacctggaacaccaagaagg
cggatgatggacaatgatgttgagattcccgatgaggagctcaatgtttctattcctggt
gcagctactgcgagaaaagggaggaaatggaccaaagccagtaggaaggcggctaagatc
caggctgccagagatgcagctcctgtcaaagtagagattttggaggttggggaaaaaggc
atgtcaatcgaagagctagcctacaacttgaccatgggtgaaggtgaaattcttgggctt
ctgttctcaaaggggattaagcctgatggggtgcaaactttggacaaagagatggtaaag
atgatatgtaaggagtatgaggtggaagtcatagatgctgatccagttagatttgaagaa
atggcaaaaaagaacgagattcttgatgaagatgatctggacaaactacaagagaggcct
cctgtgcttactataatgggtcatgtagatcatggcaagacaaccctgttggatcatatt
cgtaaaagcaaggtggctgcctcagaagctggtgggattacacaaggaatcggagcatat
aaagttatggtacctgtggatggcaagttgcaaccatgtgttttccttgacactcctggg
catgaggcatttggagcaatgagagcccgtggagcaagggtgactgacattgctattatt
gtggtggctgctgatgatgggattcgtccccagacaaatgaggccatagctcatgccaaa
gcagctggagtacccattgtgattgcgataaataagatagataaagatggagctaatcca
gaaagagttatgcaagagctttcttcaattggcctcatgccagaggactggggtggtgat
gtcccaatggttcaggtcagtgctctcaagggggaaaatatagatgatttgttggaaact
gttatgcttgttgcagagttacaagaattgaaagctaatccagatagaaatgcaaagggt
acagttattgaggcgggccttgataaatctaaaggaccaatagctacttttattgtacag
aaaggcacattgaaaagaggggatgtagtggtttgtggagaagcctttggaaaggttcgg
gctttatttgaaggtggtggaaaacgggttgatcaagtgggaccgtctatacctgtacag
gttattggtttgagtaatgtaccaattgctggtgatgaatttgaggttgttgcctccctt
gatattgcacgtgaaaaggcagaggcacgtgcagaattattatggaatgaacgtatatct
gctaaggctggggatgggaaggtgaccctttcttccttagcctcagctgtttcagcagga
aagctatctggattagacttgcaccagctgaatataataatgaaagtcgatcttcaggga
tctatggaagctgtcaggcaagccttacaagtactccctcgagataatgtgactttgaag
ttcctcttgcaagcaacaggagatgtaagcaacagtgatgttgatcttgctgttgtgagt
gaagccattattttaggattcaatgtcaaagctcctggttctgtaaaaagttatgcagaa
aaaaaaggtgttgagattcggctatatagagttatttatgaactaattgatgaagtgcgg
aatgctatggaaggacttctggaacttgttgaggaacaagaaccaattggctcaacggta
gtccgggcagtatttagcagcggcagtggtcgtgttgctggatgcatggtgacagaaggc
aaagtaataaaaggctgtggcatcagggttgtcagaaatagaaaaacagtccatgttggt
gtccttgattctttgagacgtgttaaggaaatagtgaaggaggtaaatgctggactagag
tgtggtattggggcagaagattacgatgactgggaggaaggtgatattattgaggccttc
aacacagtagagaagaagcgaacccttgaagaggcatcagcttccatggcagctgcaatg
gaagaagtaggcttatag
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integrated database retrieval system
