Populus trichocarpa (black cottonwood): 7459182
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Entry
7459182 CDS
T01077
Name
(RefSeq) two-component response regulator ORR21 isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7459182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7459182
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
7459182
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
DUF5384
Motif
Other DBs
NCBI-GeneID:
7459182
NCBI-ProteinID:
XP_002315852
UniProt:
B9HVU5
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All DBs
Position
10:complement(12709599..12714668)
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AA seq
663 aa
AA seq
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MAALQRVASSLSTSASSYGSCKGAGADLMFSDQFPAGLRVLVVDDDITCLRLLEKMLCRC
LYNVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVIMMSADG
RTSAVMRGIRHGACDYLIKPIREEELKNIWQHVIRKKWNENKEQEHSGSFEDNDWYKRGN
DDTENASSVNEGAEGVLKGQKKRNIAKEEDDNELEIDDPSASKKPRVVWSVELHQQFVSA
VNQLGIDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQGGISNTFCGPLD
SNVKVNPLGRFDIQALAASSQIPPQTLAALHAELFGRPTGSLVTTVDQPALLQASMQGPK
CIPVEHGVAFGQPLVKCQTNISKHFPRNVISVEDVASGFGAWPSNSVGTVGSSSNLGGMN
SQNSNMLMDILQQQKQQQQPLQQSSLSEPSRSINVQPSCLVVPSQSPATFQAGNSPASVD
QNCSYNRSTMIDYSLLSAQSNNSSLNIGQILNGDLKTTGVSGYSGSVSISPLSPCSVDPD
NTSQQGRSSTMAIRAVRQLPGLVPNISNLQGSYSARSSEVLDQRPLRNLGFVAKCTSIPS
RLAVDEFESTMSSLDHEKSYMEISGNKVKQEPNIEYMDNARVGIPILQQLPPAPSDLMSV
FTE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttgcagcgagtggcgtcgagcttgagcacgagcgcgagcagttacggatca
tgcaaaggtgcaggtgcagatttaatgttttctgatcagttccctgctggtttacgggtt
ctggtagtggatgatgacatcacttgcttgagattgctagagaaaatgctttgccgctgc
ctctataatgttaccacttgctcccaggccacagctgctttgaaacttctgagagaaagg
aaaggctgttttgatgtggtactaagtgatgttcacatgcctgacatggatggatttaaa
cttcttgaacttgttgggttggaaatggaccttccagttattatgatgtctgctgatggg
agaacaagtgctgtaatgagaggaatcagacatggagcatgtgattatctgattaaacct
atccgtgaagaagagctcaagaatatatggcaacatgttattaggaaaaagtggaatgaa
aacaaagaacaagaacattctggaagctttgaggataatgactggtataaacgagggaat
gatgatactgaaaatgcatcttctgttaatgaaggagcagaaggggttttgaaaggccaa
aagaagaggaacattgctaaagaagaagacgataatgaactggaaattgatgatccctct
gcatcaaagaaaccgcgtgttgtatggtcagtggagctccatcagcaatttgtcagtgct
gtaaaccagcttggaattgataaggctgtgcctaagagaatactcgagttgatgaacgtg
cctggtttaactagagaaaatgttgccagtcatttgcagaagtttagactctatttgaag
agattaagtggtgttgctcaacaaggtgggatttctaatacattctgtggaccattggac
tcaaatgtaaaggttaatccacttggaagatttgacatccaagctttggctgcctctagc
cagattcctccacaaacactagcagcactgcatgctgagctttttggtcgtcctacaggc
agcctggttacaactgtggaccaaccagctcttttacaagcgtccatgcagggtccgaaa
tgtattcctgttgaacatggtgtggcatttgggcaaccattagtaaaatgtcaaaccaac
atttccaagcattttccacgaaatgtgatatctgttgaggatgttgcttcaggatttgga
gcctggccctctaatagcgttggtacagtaggatccagtagcaatctaggagggatgaac
agtcaaaatagcaacatgttgatggacatactgcagcagcagaaacagcagcaacaacca
ctgcagcagtcatcattatcagagcccagccgttcaattaatgtgcagccatcttgcctt
gtggtcccttcccagtcaccagccacttttcaagcaggaaatagtcctgcttcggtcgat
cagaattgcagctataacaggagcaccatgattgattacagtcttctgtcagctcaatca
aataattcctcattgaatattggacaaatattgaatggggatctcaaaaccacaggtgtg
agtgggtattcaggctcagtttccatatctcccttgtcaccatgctctgtagatcctgac
aatacatctcagcaaggtcgaagctcaaccatggcaattcgagctgtaagacaattacca
ggacttgttcctaatatctccaacttgcagggttcttatagtgcaaggtcaagtgaagtg
cttgatcaaagacctcttaggaatcttggatttgttgctaaatgtactagcatcccaagc
cggttggctgtggatgaatttgaatcaacgatgagcagcttagaccatgaaaaatcctat
atggagatcagtggtaataaagtgaagcaggaaccaaacattgaatatatggataatgcc
agagtgggcatcccaatattacaacaattgcccccagcaccaagcgatcttatgagtgtt
ttcacagaatag
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