Populus trichocarpa (black cottonwood): 7459187
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Entry
7459187 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: cation/calcium exchanger 2
KO
K13754
solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7459187
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
7459187
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Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
7459187
NCBI-ProteinID:
XP_024447026
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Position
19:complement(5561428..5563887)
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AA seq
572 aa
AA seq
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MSTMVSLSEHKRRVLFLNISFLLVACTFLIVQFNSAEFLVLRSAEPFKDNGQQDCQGLVN
LDDYKTKCFYFKLHNPCVSQGYIDYLYLFYCNFEIFPLLGXSLLFLWLLVLFYLFGNTAS
EYFCSSLEDLSKLLNLSPTIVGVTLLSLGNSAPNVFASVVSFMGDGTSDFGFNTVLGGAS
FVTCVVVGILSILAKQEEFRVNRDAFVRDICFFLLVLASLIFILIYGKINMWGAMGFLLM
YIVYVMVVYISQVHGNGSINESERDHNSSNGSDLSIPILSSMEKGEHNYVKESGFECGPE
VEMNKCCFCVRLSAPCSTLLRILEMPLSLPRRLTIPVVCEKRWSKPTAVASVTLAPVLLS
TLWNAQDECATFNTILIVNGIGLMFGMTFGVLASVKIENSGPPKKCLLPWLAAGFLMSVT
WSYILAQELVGLLVSLGYIFGISPSILGLTVLSWGNSIGDLITNLILAVNRGPEGAQVAI
SGCYAGPIFNILFGLGLSLFGSACYAYPSRVVIPKDPYLLETVGFLVGGLLWALVVLPGR
NMRLDWVLGGGLLAIYLMSASSRVIQTFSSPM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccatggtctccctatctgagcacaagagaagggtcttattcttaaacatctct
tttctattggtggcatgtactttcttgattgtgcaattcaattctgctgaatttctagta
ctgagaagtgctgaacctttcaaggataatggtcaacaagactgccagggattggttaat
ctagatgactacaaaaccaagtgcttttactttaaattacataatccatgtgtctctcaa
ggctatattgactatctttaccttttctattgcaatttcgaaatatttcctcttttgggc
nntagtcttctttttctttggctcctggtattgttctatctgtttgggaacacagcttct
gaatacttttgttcttcacttgaagacttgtctaagctgttgaatttgtctcctacaatt
gtcggggttaccctcctttcacttggaaatagtgcccctaatgtttttgctagtgtggtg
tcttttatgggtgatgggacatcagactttggctttaatacagtattaggtggtgcttcc
tttgttacttgtgtggtggttggaatcttaagcattttggcgaagcaagaggaatttaga
gtcaacagggatgcctttgttagggatatttgcttcttccttttagttcttgcatcctta
attttcattttgatttatggcaagatcaacatgtggggtgctatgggctttttgttgatg
tatattgtttatgtgatggttgtttacatttcacaagtccatgggaatggtagtataaat
gaaagcgaaagggatcataattcaagtaatggaagtgatttaagcataccaattttaagc
agcatggaaaaaggggagcacaattatgtgaaggaaagtggttttgaatgtggtcctgaa
gtagaaatgaacaaatgttgcttttgcgtaagattatcagctccatgtagtacacttctc
cgaatccttgagatgcctctttccttacctaggagattgacaattcctgttgtttgtgaa
aagagatggtccaagccaaccgcagttgcttcagtgacattagcaccagttctcttatca
actctttggaacgcccaagatgagtgtgccaccttcaacacaatcctaatagtaaatgga
attgggttgatgttcggaatgacatttggggttcttgcatctgtaaaaattgagaattca
ggtccaccgaagaagtgcttgcttccttggctagcagcggggttcttaatgagtgtgaca
tggagttatattctagctcaggaactggtaggcttgttagtttcacttgggtatatattt
ggaattagtccttctatactaggactaacagttctttcctgggggaactcaattggtgat
ttgataacaaatttgattttggctgtgaatcgtggcccagaaggtgcacaagttgctata
tcaggctgttatgcaggtcccattttcaacatccttttcggtctgggattgtctctgttt
ggctcagcctgttatgcgtacccatcacgtgttgtgatcccaaaagatccatatctattg
gagacagtaggctttttagtaggtggcctgctttgggcacttgttgttttacccgggaga
aatatgaggcttgattgggtgctgggaggaggactcttagctatatacttgatgtctgct
tcttcgagggtaattcaaacttttagctctccgatgtga
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