Populus trichocarpa (black cottonwood): 7459765
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Entry
7459765 CDS
T01077
Name
(RefSeq) endoglucanase 8
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00500
Starch and sucrose metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
7459765
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
7459765
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
SIM_C
Motif
Other DBs
NCBI-GeneID:
7459765
NCBI-ProteinID:
XP_002315868
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All DBs
Position
10:complement(12978895..12983467)
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AA seq
496 aa
AA seq
DB search
MARKPLITFLGNFRVTAFLLLLLLTSRQVIGGGHDYHDALRKSILFFEGQRSGKLPPDQR
VKWRRDSALHDGSSVGRDLTGGYYDAGDNIKFGFPMAFTTTLLSWSIIDFGRNMGPELKN
AVKAVKWATDYLLKVTAVPNVVYVQLGDAYSDHNCWERPEDMDTLRTVYKIDGSHPGSDV
AGETAAALAAASIVFRSRDPAYSRLLLNRAVRVFDFADSHRGAYSSSLHSAVCPFYCDVN
GYQDELLWGAVWLHKASRRRRYREYIVKNEVILHAGDTINEFGWDNKHAGINVLISKEVL
MGRAEYFESFKHNADGFICSILPGISHSQVQYSPGGLIFKAGGSNMQHVTSLSFLFLAYS
NYLSHANKAVPCGEKTASPALLKQLAKRQVDYILGDNPLRMSYMVGYGPRYPQRIHHRGS
SLPSVRAHPARIRCKEGSRYFLSPNANPNVHVGAVVGGPNVTDAFPDSRPFFQESEPTTY
INAPLVGLLAYFSAHP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaaaacccctaatcacttttctgggaaattttcgcgtcactgcatttctctta
ttactactcctcacttctcgtcaagtcataggcggcggccatgactaccacgacgctctc
cgcaagagcattctcttcttcgaaggccagcgctccggcaagctccctccagatcaacgc
gtcaagtggcgccgcgactccgccttgcacgacgggtcctctgttggcagggatttgacg
ggaggatactacgacgccggggataacataaagtttggattcccaatggcatttactacg
acgttgttgtcatggagcattatcgatttcggaaggaacatgggaccggagttgaaaaac
gccgttaaggccgtcaaatgggcgactgattacttactaaaagtaacggcggtgcctaac
gtcgtttatgttcagttaggtgacgcgtattccgatcataactgctgggagaggccagag
gacatggatacactgagaacggtgtataaaatcgatgggtctcacccagggtctgacgtt
gcaggtgaaactgccgctgcattggccgctgcgtccattgtgtttcgttcacgtgaccct
gcttactctaggttgcttctcaatcgggccgttagggtcttcgactttgctgacagccac
cggggtgcgtacagtagtagcctgcactctgcagtgtgccctttctactgtgacgtgaat
ggttaccaggacgagttgctctggggagcagtgtggttgcacaaggcttcacgcaggcgc
agatacagagagtacatagtgaaaaacgaggtcatattgcatgctggagataccatcaat
gagtttggttgggataacaagcacgctggcatcaacgtcctcatttccaaggaggtttta
atgggaagagcagaatatttcgagtctttcaagcacaatgcagacggctttatctgttct
atattacctgggatctctcattctcaagttcaatattctccaggtgggctgatcttcaag
gctggagggagtaacatgcagcatgtaacgtcgttgtctttcctgtttctggcgtattct
aattatctaagccatgccaataaggccgtgccatgtggtgagaagacagcatcccctgcc
ctcctcaagcaattggccaaacgtcaggtggactatattcttggagataatccactgagg
atgtcatacatggtcggatatggtccacgttatccacagaggatccaccacaggggcagc
tcgttgccatcagtgcgagcgcaccctgctcgcattaggtgcaaagaggggtctcgctat
ttcttgagtccaaatgcaaaccccaacgtgcatgttggtgcggttgttggtgggcctaac
gtcacggatgcttttccagattccaggccgttctttcaagagtcagagcccacgacatac
atcaatgctcccttagtaggcctacttgcatacttttcagcccacccttga
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