Populus trichocarpa (black cottonwood): 7459906
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Entry
7459906 CDS
T01077
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7459906
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7459906
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
7459906
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
7459906
Ubiquitin system [BR:
pop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
7459906
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
HNH_5
Ecl1
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
7459906
NCBI-ProteinID:
XP_024460208
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All DBs
Position
6:26389931..26396276
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AA seq
633 aa
AA seq
DB search
MHVGGITVDLNWLLQFIFTVFVIGLGLLHLVKNTASKYFEVGANFEAAESSHTAIDPNII
NQAVEAEEDSSICGNCGGFGTKKCSRCKSVRYCSQRCQEADWKAGHKLKCKDFKLNSSQT
VRSNFGFKPSGGGSRSFSNAALVPANGVSNSKPIKKPGKVLFPYDEFIKLYNSDKPEFSP
CGLLNCGNSCFANVVLQCLTYTRPLVAYLLKKGHQTECRHNDWCFLCEFQSHVERASQST
LPFSPINIISRLPNIGGNLGYGRQEDAHEFMRLAIDTMQSVCLDEFGGEKAVEPASQETT
IIQHIFGGRLQSQVICTKCNKISNQFENMMDLTVEIHGDAASLEECLDQFTDKEWLHGEN
MYKCDRCNDYVKAWKRLTIQRAPNVLTIALKRFQSGRFGKLNKRVTFPEMLDLSPYMSEG
GDGTDVYKLYAVVVHVDMLNASFFGHYICYTKDFHGNWHRIDDCKVSSVELDEVLSQGAY
MLVYSRVSVRPSCLRTIEPSKEQQSIVKVELDSCTENPVEHLSPIESMDATNSGFPAPEN
VNSEVGSEHPESGTGNEDHDDMIGVDYCSSLSIPVEVSGLKKDSAAALDSEAVVIEHSLD
YTDTVMSESDSAVAKDIQVNGSIYSFSSEEIST
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcggtggaataacagtggatctgaattggttactacaatttatattcactgtt
tttgtaattggtttggggttgttacacctcgttaagaatacggcgtccaagtatttcgaa
gtcggcgctaatttcgaagcagctgagagtagccacactgctattgatccaaatattatt
aatcaagccgtggaagctgaagaggactctagtatctgtggaaattgtggcggtttcggg
actaaaaagtgttctcgttgcaaatccgtgagatattgctcacagagatgccaagaagca
gactggaaggctggccataagttaaaatgcaaggatttcaaattaaattcttcacaaaca
gtaagatcaaactttggttttaaaccttcaggtggtgggagtagaagcttttctaacgct
gcacttgttcctgccaatggggtttctaactccaagcctataaagaagccaggaaaggtt
cttttcccgtatgatgagttcattaaactttacaactcagacaagcccgaattctctccc
tgtgggctcttaaattgtggaaacagttgctttgccaacgtggttttacaatgcctcaca
tacacaaggccacttgttgcatatttgttgaagaaaggtcatcaaacagaatgtagacat
aatgattggtgttttctttgtgaattccaatcccatgttgaaagagcaagccaaagcacg
cttcccttttcaccaataaatattatttctcggttacctaatattggtggtaatcttggc
tatggaagacaggaggatgctcatgagttcatgaggcttgctattgatactatgcaatca
gtatgccttgatgaatttggtggagaaaaggctgttgaacctgcctctcaagagactaca
ataattcaacacatatttgggggtcgcctccaatctcaggtgatatgcacaaaatgcaat
aagatttcaaatcagtttgagaacatgatggatttaactgttgagattcatggtgatgct
gcatccttggaggaatgcctcgatcaattcacagacaaagagtggcttcatggagaaaat
atgtacaaatgtgacaggtgcaatgactatgtcaaggcatggaagcgtcttaccattcaa
cgagctccaaatgttcttacaatcgctttaaagagattccagagtgggaggtttggtaaa
cttaacaaaagggtaacttttcctgagatgttagatctgagcccctacatgagtgaagga
ggagatggcactgatgtgtacaagctttatgcagttgttgtccatgtggatatgctaaat
gcatcattttttggtcattacatctgctacaccaaggatttccatggaaactggcacaga
attgatgactgcaaggtttctagtgttgaattagacgaggtactttctcagggcgcatat
atgcttgtgtacagcagggtttctgttcgaccatcatgtctcagaaccattgagccttca
aaggagcagcaatcaatcgtgaaagtagaactagattcttgcacagagaacccagttgaa
cacctttcaccaatagagtcgatggatgccacaaattctgggttcccagcacctgaaaat
gtaaattctgaagttggaagtgaacatcccgagtcagggactggtaatgaagatcatgac
gatatgattggagttgattactgctcaagtttatccattccagtggaggtttctggcctc
aagaaggattccgctgctgcacttgattcagaagctgttgtgatagagcactccttggac
tatacagatacagtcatgtctgaatcagattctgccgttgcgaaggatatccaagtaaat
ggcagtatttattcattctcgagtgaagagatttcaacataa
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