Populus trichocarpa (black cottonwood): 7460061
Help
Entry
7460061 CDS
T01077
Name
(RefSeq) probable calcium-binding protein CML48
KO
K13448
calcium-binding protein CML
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
7460061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_9
Vwaint
Motif
Other DBs
NCBI-GeneID:
7460061
NCBI-ProteinID:
XP_002313594
UniProt:
A0A3N7H099
LinkDB
All DBs
Position
9:12558055..12560723
Genome browser
AA seq
247 aa
AA seq
DB search
MSFFSKKPRSSSSSSSSSSYAPSAPSLPESYDQRGQAYSTSHQSNHSQQQQQSYYGQGNG
GGSSYGHSGFPPGTSPDVIRSFEMVDRDRSGFIDENELQQAVSSGYQRFSIRTIRLLMFL
FKNPHDPLRFGPKEFAALWGCLGQWRGIFERYDKDRSGKIDLFELRDALYSLGFAIPSSV
LQVLISKYDDGSGRRIELNFDSFVECGMILKGLTEKFKEKDKRHTGTTTFNYDEFMSMVI
PFLVSYD
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttttctctaaaaaaccacgatcatcatcatcatcatcatcatcatcatcttat
gcaccctctgctccatctctacctgagtcatatgatcaacgaggtcaggcatacagcact
tctcatcaaagtaaccacagccagcagcagcagcagtcttattatggacagggcaatggt
ggtggctcttcatatgggcactcaggttttccaccagggacatctccagatgttattagg
agctttgagatggttgatagagataggagtggatttattgacgagaacgagttgcaacaa
gctgtttcttctggttaccaaaggtttagtattaggactattaggttgctcatgtttctc
ttcaagaatcctcatgatcctctacgatttggacccaaagaatttgctgctttatggggt
tgtcttggtcagtggaggggcatatttgagagatatgataaagacaggagtgggaaaatt
gatttgtttgaactgagggatgctctttatagccttgggtttgctattccatcttcggtt
cttcaggttctgatttccaagtatgatgatggaagtggccgaaggattgaactcaatttt
gacagttttgtcgaatgcggcatgattttgaagggattgactgaaaaatttaaggagaag
gataagcgtcataccggcacaacaacatttaattatgatgaattcatgtccatggtcatt
ccatttcttgtatcgtatgactga
DBGET
integrated database retrieval system
