Populus trichocarpa (black cottonwood): 7460071
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Entry
7460071 CDS
T01077
Name
(RefSeq) transcription factor E2FB isoform X2
KO
K06620
transcription factor E2F3
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7460071
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
7460071
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GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
GCN5L1
TrmB
SKA1
Motif
Other DBs
NCBI-GeneID:
7460071
NCBI-ProteinID:
XP_002312830
UniProt:
B9HQ23
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Position
9:complement(12485298..12491306)
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AA seq
473 aa
AA seq
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MSSSQAPNNQSMKQPQQNSMQSHAPNQCQQHQQLPFSSMKPHFLPPGDYHRFGVDHRRPV
SDHDVEGIVVKPPTLKRKSDAADHQGESSEWNAGHGYMEVVTSPLQTPVSGKGGKTPKTS
RLSKSGKSASQSAAGALGSPGNNVTPTGPIRYDSSLGLLTKKFINLIKHAEDGILDLNKA
ADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRSREGDDNNVATLQAEVENL
TIEERRLDEQTREMQERLRDLSVDEKNQKWLFVTKEDIKILPGFQNETLIAIKAPHGTTL
EVPDPDEAVDYPQRRYRIVFRSTMGPIDVYLVSQFEEKFEDIQGAEPPPSDSSTSGFNEN
AATTMVTEESRAKEFEMQEQDGHRICSEPNTSHDFVSGIMKIVPSDVNSDADYWLLSDAD
VSITDMWRNEPVVEWNDLDTLHNDYVMPNFSTPQPQTPSNPTEVPPAANTTAG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcacaagcaccaaacaaccagtcaatgaagcagccgcagcagaatagtatg
cagagtcacgcaccgaatcaatgccagcagcatcagcagcttccgttttcttctatgaag
ccgcattttctgcctcctggtgactaccaccggttcggtgtcgaccatcgacgacccgtt
tctgatcatgatgttgagggcattgttgttaaacctcctacattaaagcggaaaagtgat
gcagcggatcatcaaggtgagtccagtgagtggaatgctggtcatggatatatggaagta
gttaccagccccctccagacacctgtatcaggaaaaggtggaaagacacccaaaacatcg
agactctcaaagagcggtaaatctgcatctcagagtgctgctggagctcttggttctcca
ggaaataatgttactccaactggtccaattcgctatgacagctctctaggtctcttgact
aagaaattcatcaatttgatcaaacatgctgaagacggtatccttgatcttaataaagct
gctgatactttggaggttcaaaagaggcggatatatgatataacaaatgttctagaagga
attggtcttatagaaaagaagctcaagaacagaattcagtggaagggacttgatgtatca
aggtcaagggagggagatgataataatgttgctactttgcaggcagaagttgaaaacctg
accattgaggaacgcagattagatgaacaaacaagagaaatgcaagaaagattgagggac
ctcagtgtagatgaaaaaaatcaaaagtggctttttgtcactaaggaagacatcaagatt
ttacctggcttccagaatgaaaccttgatagcaatcaaagctccacatggtaccactcta
gaagttccagatcctgatgaggcagttgattatccccagaggagatacaggatagtcttc
aggagtacaatgggtccaatagatgtttatcttgtcagtcaatttgaagagaaatttgaa
gatattcaaggtgctgaaccacctccaagcgactcgtcaacctcaggttttaatgaaaat
gccgctactacaatggtcacagaggagagcagagcaaaggagtttgagatgcaagaacaa
gatggtcatagaatctgctcagaacctaacacctcacatgactttgtgagtgggatcatg
aagattgtcccctcggatgttaatagtgatgcagattactggcttttatcagatgctgat
gttagcatcacagacatgtggcgcaacgaacctgtggttgaatggaatgacttggatacg
cttcataatgactatgtcatgccaaatttcagcacaccacaaccccaaactccatctaat
ccaacagaagtgcctcctgctgctaacactactgccgggtga
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