Populus trichocarpa (black cottonwood): 7460215
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Entry
7460215 CDS
T01077
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7460215
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7460215
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
7460215
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
7460215
Ubiquitin system [BR:
pop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
7460215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
7460215
NCBI-ProteinID:
XP_002303905
UniProt:
B9GWK0
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All DBs
Position
3:complement(20234195..20239256)
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AA seq
543 aa
AA seq
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MSDSKKVLVFGSFTEDETKSLLGKQSPGKVEKPVEKIELRFGSLNFGTGITFGNFDTTLN
TQLASANGNVTSQSKSLVMKEKDVKVAKEGDGVLGSPRENGSIGNSNHGSSLSNGVDVLK
TESIDLTSLHLSEKEDGPASPLQSSSFHVLDSEGIKDGDHDGTTNDSSIHVRKEDVWKAN
DGPLPAVKSLLPRGLINTGNLCFLNATLQALLSCSPFVQLLQELRIRDIPKVGFPTLTAF
SEFVCDFDMPTSSNLKKDAVETGRPFRPAVFEAVLKNFTPDVPNSISGRPRQEDAQEFLS
FIMHQMHDELLKLEGQSSGTNGFKTSVVSSTEEDEWETVGPKNKSAVTRTQSFIPSELSD
IFGGQLRSVVKARGNKASATVQPFLLLHLDIHLEVVRTIEDALHLFSAPENLEGYRTSAI
GKSGVVTAKKSVKIQTLSKIMILHLMRFSYGSQGSAKLLKPVHFPLEFILSRELLVSPST
ESRKYELVATVTHHGREPSKGHYTADVRHSNGQWLRFDDASVTAITTSKVLHDQAYVLFY
KQV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactctaagaaggtactggtatttggttcattcactgaagatgaaacgaaatcg
ttgctgggaaagcaatcacctggcaaagtcgaaaagccggtagagaagatagaactgcga
tttgggtctttgaattttggaactggaataacttttggtaattttgataccacattgaat
acgcaattggcttctgctaatggaaatgttacttctcagtctaagagtttagttatgaag
gaaaaagatgtgaaggttgccaaggaaggtgatggggtgttaggaagtccgcgagaaaat
ggaagcataggcaattcgaaccatggttcttccctcagtaatggtgtggatgtcttgaaa
actgagagtatcgatttaacttctttgcacttgtctgagaaggaagatggtcccgcaagt
ccattgcaaagttcgagctttcatgtccttgatagtgaaggcattaaggatggggatcat
gatgggactaccaatgattcgtcaatacatgtgagaaaagaggatgtttggaaagcaaat
gatgggcctcttcctgctgttaagagtttgctaccccgtggcctgattaatacagggaat
ctttgctttcttaatgcgaccctgcaggcgctcttatcctgttccccttttgtgcagcta
ttgcaggagcttagaatccgtgacatccctaaggttggctttcctacattgactgcattt
tcagagttcgtctgtgactttgacatgccaaccagttcaaacttgaaaaaagatgctgtt
gagactggtcggccttttcgtcctgccgtgtttgaagctgttcttaaaaatttcacccca
gatgtgccaaatagcatatcaggacggccaaggcaggaagatgctcaagagtttctgagt
ttcatcatgcatcaaatgcatgatgaattacttaagcttgaaggacaatcctctggtacg
aatggttttaaaacctctgtagtttcttctacagaagaagatgaatgggagacagtgggg
ccaaaaaacaaatctgcagtgactagaacacaaagcttcattccttctgagttaagtgat
atttttggaggacagttgagaagtgtggttaaggcaagaggaaacaaagcttctgcaaca
gttcaaccatttttgttgctccaccttgatattcaccttgaagttgttcgcactatcgag
gatgcactccatctgttctctgcacctgaaaatcttgaagggtaccggacttctgcaatt
gggaagagtggtgtggtgactgcaaaaaaatctgtcaaaatacagacactttcaaagata
atgatattgcacttgatgcgttttagttatggaagccaagggagtgccaagttgctcaag
cctgtgcactttcctcttgaattcattctgagtcgggaattacttgtttccccatcgaca
gagagccgaaagtatgaactagttgccacagtaactcatcacgggagggagccttcaaaa
ggtcattatacagctgatgtgcgccattctaatggccagtggctacgttttgatgatgca
tctgtcactgccatcacaacgagtaaggttttgcatgaccaggcttacgttctcttttac
aaacaagtttag
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