Populus trichocarpa (black cottonwood): 7460454
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Entry
7460454 CDS
T01077
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog isoform X1
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7460454
Membrane trafficking [BR:
pop04131
]
Protein recycling
Others
EARP complex
7460454
Endosome - Golgi transport
Tethering complex
GARP complex
7460454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
EXOC6_Sec15_N
COG5_N
COG2_N
Motif
Other DBs
NCBI-GeneID:
7460454
NCBI-ProteinID:
XP_052306637
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All DBs
Position
2:15904928..15916326
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AA seq
782 aa
AA seq
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MGEDDMPMDDKAKRMRDLLSSFYSPDPSVTNANNPFKFASLDVINTTSFDADQYMNLLVQ
RSNLEGLLQKHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKTNIVGMETNMEQL
LDKIMTVQSRSDGVNTSLFEKREHIEKLHRTRNLLRKVQFIYDLPARLGKCIKSEAYADA
VRFYIGAMPIFKAYGDSSFQDCKRASEEAMDTIIKNLQGKLFSDSESIQARAEAAVLLKQ
LDFPQVDSLKAKLFEKLEQSLDGLQLTHEEIANVTVESSNLSEQGNNTESIPGSAHGALV
SEFAEAVRAYQVIFPDSEKQLIKLSQDLITKHFEITSDFIKKWIPIANFLGVLRIIWKDV
LLIDKVLHEALLPDYSSKASRIAVRQYIKRTFSHLLHDISDALTNVHIKPKEEVDEHPLV
VFLEAGKSSVLQGSVNVLLDFRQLLKENLGGLQLSGLIVDWVQEGFQDFFRALHDQFFLL
SGKNKSAIQDENSTKGMQVEKVVPGLVLVLAQLSIFIEQTAISRITEEIAAYFSGGGGGA
HENGPAFVPGEICRTFHSAGEILLQHYINMRTQKITVLLRKRFTAPNWVKHKEPREVHMF
VDLFLQELEAIGTEAKQILPHGVLRKHRRSESNGSSASSRSNSLRDDKMSRSNTHRARSQ
LLEKHLAKLFKQKVEIFTKTEYTQESVVTTVVKLCLKSLQEYVRLQTFNRSGFQQIQLDV
QFLRASLKEIVEDEAAVDFLLDEVIVGASERCLDPIPLEPPILDKLIQAKLAKEKEQTPI
SP
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggacgatatgccgatggatgacaaggcaaagagaatgagagatctgttatca
agcttctattctccagatccttcagttaccaatgctaataatcctttcaaatttgcttcc
ttagatgtcatcaacaccacctccttcgatgcagatcagtacatgaatctgctggtgcaa
agatcaaacttggaagggcttttgcagaagcatgttgagatggcagctgagataaagaat
ctagacactgatttgcaaatgttagtttatgaaaactacaacaagtttattagtgccact
gacacaatcaaaaggatgaaaactaatattgttggcatggaaacgaatatggagcagctc
ctcgataagataatgactgtgcaatcaagaagtgatggcgtgaacacttctcttttcgag
aagagagaacatatagagaaattgcatcgcacacgcaaccttcttcgaaaagttcagttc
atatatgatctacctgctagacttgggaagtgtattaaatcagaggcatatgctgatgca
gtcaggttctacattggagcaatgccaatttttaaggcgtatggggactcatcattccag
gattgtaagcgagcatccgaagaagctatggacacgattataaaaaatctgcagggaaag
ctattctcggattctgaatccatacaagcaagggctgaggctgctgtacttcttaaacag
ttggattttccgcaggtggacagcttaaaagcaaaactgtttgaaaagttagaacaatct
cttgatggccttcagctcacgcatgaagagatagccaatgttacggttgaatctagtaac
ctttctgagcaaggaaataatactgagtcaattcctggttctgcacatggtgctttagtt
agtgagtttgctgaagctgttcgagcttatcaagtaatatttcctgactcagaaaagcaa
ctgattaaactttctcaagacttgattaccaagcacttcgagatcacttcggattttata
aagaagtggattcccattgctaattttctgggtgttcttcgaattatatggaaagatgtg
ctcctgatagataaggtgttgcatgaggctcttctccccgattattcttcgaaggcttcc
cggattgctgtcagacaatatataaaaaggacattttctcaccttctgcatgatatctca
gatgccctaaccaatgtccatatcaaaccaaaggaggaagtggatgagcatcctctggtg
gttttcctggaggcaggcaaaagctcagtgcttcaagggagcgtgaatgtcttactggac
ttccgccaacttctcaaggaaaacttaggagggcttcaactgagtggcttgattgttgat
tgggttcaagaaggatttcaagatttcttcagggcactgcatgatcagttcttcttgctt
tcagggaaaaataaatctgccattcaagatgaaaattccacaaagggtatgcaggttgag
aaagtggttcctggtcttgtcctggtgctggctcaactgtctatttttattgaacaaact
gccatctctagaattactgaggaaatagctgcttatttctctggtggtggtggtggggct
catgaaaatgggccagcatttgttcctggtgaaatttgtcgaaccttccattcagctggt
gaaattcttctacagcattatataaatatgagaactcaaaaaataacggttctcctgagg
aagaggtttacagctccaaattgggtcaagcacaaggagccaagagaagttcatatgttt
gttgatttattccttcaagagttggaagcaattggaacagaggcaaagcagatcctacct
catggagtacttcgcaagcatcgtcgctctgaaagcaatggaagctctgcttcctcccgc
agcaattcattacgggatgacaaaatgagtcggtcaaacacccatcgggccaggagtcaa
cttcttgaaaaacacctagcgaaattgttcaagcaaaaagttgagatttttacaaaaacc
gaatatactcaggaatctgttgtaactactgttgtaaaactctgtcttaaaagtttgcaa
gaatatgttagactccagactttcaaccggagtggatttcagcaaattcaattggatgtt
cagtttctaagggcttctctaaaggaaattgttgaagatgaagctgctgttgactttttg
cttgatgaggtgattgttggtgcttcggaacgctgccttgatccaattcctctggagcct
cctatcttggataaattaattcaagcaaagttggcaaaagagaaggaacagactccaatt
tctccataa
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