Populus trichocarpa (black cottonwood): 7460499
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Entry
7460499 CDS
T01077
Name
(RefSeq) ABC transporter B family member 11 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7460499
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7460499
04147 Exosome [BR:
pop04147
]
7460499
04090 CD molecules [BR:
pop04090
]
7460499
Enzymes [BR:
pop01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
7460499
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
7460499
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7460499
CD molecules [BR:
pop04090
]
Proteins
7460499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
ABC_ATPase
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_30
AAA_25
AAA_15
DEAD
AAA_7
DUF815
DLIC
Motif
Other DBs
NCBI-GeneID:
7460499
NCBI-ProteinID:
XP_024451663
LinkDB
All DBs
Position
2:complement(14972315..14980926)
Genome browser
AA seq
1294 aa
AA seq
DB search
MAVENGRSRDKSMDEASTSKSQEVEEKSSAGNGDQQKQEKSEGDEETKTVPFIKLFSFAD
SKDIFLMILGTVGAIGNGASMPIMSILFGDLINSFGKNQNNKDVVDLVSKVSLKFVYLGV
GSAVGSFLQVACWMVTGERQAARIRGTYLKTILRQDVAFFDKETNSGEVVGRMSGDTVLI
QDAMGEKVGKFIQLVSTFIGGFIISFIKGWLLTLVMLSSIPLLVIAGAGLSIMIARMASR
GQTAYSKAASVVEQTIGSIRTVASFTGEKQAISNYKKFLVTAYNSGVQEGLAAGVGLGIV
MLVVFCSYALAVWFGGRMILEKGYTGGDVINVIVAVLTGSMSLGQASPCMSAFASGQAAA
YKMFEAINRKPEIDASDTRGKILDDIRGDIELRDVYFNYPARPDEQIFSGFSLFIPSGST
AALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLKWIREKIGLVSQEPVLFTS
SIKDNIAYGKDMATTEEIRAAAELANAAKFIDKLPQGIDTMVGEHGTQLSGGQKQRIAIA
RAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIY
RGKMVEKGSHSELLKDPEGAYSQLIRLQEVNKESEQEADDQKKSDISTESLRHSSQKISL
KRSISRGSSDFGNSSRRSFSVTFGLPTGFNAPDNYTEELEASPQKQQTPDVPISRLVYLN
KPEVPVLIAGAIAAIINGVIFPIFGILISRVIKTFFEPPHELRKDSKFWALMFMTLGLAS
FVVYPSQTYLFSVAGCKLIQRIRSMCFEKMVHMEVGWFDEPEHSSGAIGARLSADAATVR
GLVGDSLSQLVQNIASAVAGLVIAFVACWQLAFVILVLLPLIGLNGFIQMKFLKGFSSDA
KKMYEEASQVANDAVGSIRTVASFCAEEKVMQLYRKKCEGPMRTGIRQGLISGAGFGVSF
FLLFSVYATSFYVGAQLVQHGKTTFADVFQVFFALTMAAIGISQSSSFAPDSSKAKAAAA
SIFSIIDRKSQIDSSDESGTTLDNVKGEIELRHIGFKYPARPDIEIFRDLSLAIHSGKTV
ALVGESGSGKSTVISLLQRFYDPHSGHITLDGIDIKSLQLKWLRQQMGLVSQEPVLFNET
IRANIAYGKEGDATEAEILAASELANAHKFISSLQQGYDTVVGERGIQLSGGQKQRVAIA
RAIVKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVK
NGVIVEKGKHETLIHIKDGFYASLVALHMSASTS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgagaacgggagaagtcgtgataagagtatggatgaggccagcacatcaaaa
agccaggaggtagaggagaaaagttctgccggaaatggggaccaacagaagcaagagaag
agcgaaggagatgaggaaactaaaacagttccgtttatcaagctcttttcatttgcggat
tctaaagatatctttctgatgatccttgggacggttggcgctattggaaatggagcatcc
atgccaattatgtcaatactgttcggagatctgatcaattcttttggaaaaaaccagaat
aataaagatgtagtggatttggtttcaaaggtgtctctcaaatttgtctacttgggagtt
ggttctgctgtaggttcatttctccaggtggcttgctggatggtcacaggagagagacag
gctgcacggataaggggtacgtatttgaaaactatactgagacaagatgttgcctttttc
gacaaggaaacaaactctggagaggttgttggtagaatgtctggtgacactgttcttata
caagatgctatgggtgaaaaggtcgggaaatttatacagctagtatcaacattcattggc
ggctttataatatcatttatcaaaggctggcttcttactcttgtcatgctatcctccatt
cccctgcttgtgatagctggtgcaggattgtccatcatgatagctaggatggcatctcgt
ggccaaactgcttacagtaaggcagcgtctgtagtagaacagactattggctcaatcaga
actgttgcatcattcactggggagaagcaagccataagtaattacaagaagtttcttgtc
actgcttataactctggtgttcaagaaggcttggctgctggagtaggtcttggcattgtt
atgttagtagtgttctgtagctatgctttggcagtatggtttggtggaaggatgattttg
gaaaaaggatataccgggggtgatgtgattaatgtgattgttgctgtgttgaccggttct
atgtctctagggcaggcatctccttgtatgagtgcatttgcatctggtcaagctgcagct
tataagatgtttgaggctatcaatagaaagccagagatagatgcctccgatacaagggga
aagatattggatgacatcagaggagatatagagttgagggatgtatatttcaattatcca
gccagacctgatgagcaaatattttctggattctctcttttcatcccaagtggatcaact
gcagcattggttggacaaagtggaagcggaaagtcaacggtgatcagtctgatagagaga
ttctatgatccacaagctggtgaagttctcattgatggcattaacctcaaagagtttcag
ctcaaatggattcgggagaaaattggtcttgtcagccaggaacctgtgctgttcacgtcc
agcattaaggataacattgcatatggaaaggatatggcaactaccgaagagataagagct
gcagctgaacttgccaatgctgctaaattcatcgataaactacctcagggaatagacacc
atggttggtgaacatggaactcagctgtctggtggacagaaacagagaattgcaattgca
agagccatcctgaaagatccgcgaattttacttttggatgaagctacaagcgctcttgat
gcagaatctgaaaggatagtgcaggaggcattagacaggattatggtgaatcgaacaact
gtaattgttgcccaccgtttgagcactgtgagaaacgcagatatgattgctgttatttac
cgtgggaagatggtggagaaaggttcacattcagaactgctcaaggatcctgaaggagct
tactcgcagcttatacgcttacaagaagtgaacaaagagtcggaacaagaagcagatgac
caaaagaagtcagatatttctaccgagtccttaagacattcaagtcaaaaaatttcactg
aaacggtccataagtcggggatcatctgattttggaaatagcagtcgccgctcgttttca
gtgacatttggtttacctactggattcaatgcccctgataattacacggaagaattagaa
gcttctccacagaaacaacaaactccagatgtcccaatcagccgccttgtgtatctcaac
aagccggaggttccagtgctgattgctggagctatagctgcaattatcaatggggtcata
tttccgatatttggtatactaatttccagggtgattaaaacattttttgaaccacctcat
gaattgagaaaggattcgaagttctgggcgttgatgttcatgacccttggcctggcatct
tttgttgtgtatccgtcacaaacatacttattttcggtggctggttgcaaattaatccaa
aggatccgatctatgtgttttgagaagatggttcacatggaggttggttggtttgacgag
cctgagcactcaagtggagcaattggtgctaggctctcagcagatgctgcaacagtgcgt
ggtctggttggagattctctttcccagttggttcagaacatagcatcagcggtagcgggt
ttggtcattgcctttgttgcatgttggcaattggcatttgtaatccttgtactacttcct
ctaataggactcaatggatttattcaaatgaagttcttgaaaggattcagttcagatgca
aagaaaatgtatgaggaagcgagccaagttgccaatgacgctgttggcagcataagaact
gttgcctctttctgtgctgaagagaaggtgatgcaactatacagaaagaaatgtgaaggc
cctatgaggacaggaataaggcaagggctgataagtggagcaggatttggagtttctttc
ttcttacttttttctgtctacgcaactagtttctatgtgggagcacaacttgtccagcat
gggaaaactacttttgcagatgtttttcaagttttctttgctttaaccatggcagcgatt
gggatttctcaatcaagctcctttgcccctgattcctcaaaagccaaggctgcagctgct
tccatattctccattatagaccgaaagtcgcagattgattcaagtgatgagtcgggaaca
acattagacaatgtgaagggagaaattgaacttcgtcacataggctttaagtatccagct
aggccagacattgaaattttccgagacctcagcttagctattcattctggcaagactgtt
gcccttgttggagaaagcggaagtgggaaatcaacggtgatctcgttattgcaaaggttt
tatgatccccattcaggccatataactcttgatggaattgacattaaaagtcttcaactt
aagtggttgaggcagcaaatggggcttgtgagccaagaaccagttctcttcaatgaaaca
atccgcgccaacattgcatatggaaaggaaggcgatgcaacggaagcggaaattctagct
gcgtcggagctagcaaatgcacacaagttcatcagtagtttgcaacaggggtacgatacc
gttgtaggggagagaggaatccaattatccggcggacagaaacaaagggtggccattgct
cgtgccatagtcaaaagtcccaaaatacttctgctggatgaggctaccagtgcactggat
gccgaatctgaaagagtggttcaagatgccctggaccgagtaatggtgaacaggactacg
gtcgtcgtcgcccaccgattatctacaatcaagaacgcagatgttattgccgtggtgaaa
aatggagttatcgtagagaaaggcaagcatgagactctgattcatatcaaagatggtttt
tatgcctccttagtggctcttcacatgagtgcctcaacttcttga
DBGET
integrated database retrieval system
