Populus trichocarpa (black cottonwood): 7460508
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Entry
7460508 CDS
T01077
Name
(RefSeq) pleiotropic drug resistance protein 1 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7460508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7460508
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
7460508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
AAA_16
ABC_trans_N
AAA_33
AAA
AAA_25
AAA_28
RsgA_GTPase
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
7460508
NCBI-ProteinID:
XP_024460929
LinkDB
All DBs
Position
1:3653114..3660468
Genome browser
AA seq
1434 aa
AA seq
DB search
MESADIYRASSSLRDSLRAGSFVWRNSTVEAFSRSSREEDDEEALKWAALEKLPTYDRLR
KGILMSASRGVSSEVDIEKLGVQERKQLLERLVKAADEDNEKFLWKLKNRIERVGIEFPT
IEVRYEHLNIGAEAYVGSGALPSFAKFTFSIIEDLLIALRIIPSRKKPLTILKDVSGIIK
PSRLTLLLGPPSSGKTTLLLALAGKLDPSLKYSGRVTYNGHGMNEFVPQRTASYTSQQDL
HIGEMTVRETLAFSARCQGVGNLHDMLAELSRREKEANIKPDPDIDVFLKAVATQGQEAN
VITDYVLKILGLEVCADTLVGDEMIRGISGGQRKRVTTGEMLVGPSRALFMDEISTGLDS
STTHQIVNSLKQTIHILNYTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRENVLGFF
EHLGFQCPERKGVADFLQEVTSRKDQEKYWARKDQPYRFVTVNEFAEAFQSLSVGRRVIE
ELSIPFDKTKNHPAALVNKKYGAGKMDLLKANFSREFLLMKRNSFVYIFKIFQLTMMAII
SMTLFFRTKMPRDTVEDGGIYAGALFFTAIMIMFNGMAELSMTIAKLPVFYKQRELLFFP
PWTYSIPPWILKIPITFVEVAAWVFLTYYVIGFDPNIGRFFKLYAVLVLINQMASALFRF
IAAAGRNMIVANTFGSFVLLAVFALGGVILSREQIKKWWIWGYWASPLMYGQNAIVVNEF
LGNSWSHIPAGSTESLGIQVLKSREFFTEAYWYWIGIGATAGFILLFNVCFVVALTVLDA
YEKPQAVISEEPESGDSEGAVQLSNRGISHQTNTDSIGEASNNRKKGMVLPFEPHSITFD
DVIYSVDMPQEMKVQGVAEDRLALLKGVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKT
GGYIEGDIKISGYPKKQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLPSEVDSETR
KMFIEEVMDLVELNPLRSALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD
ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELFLMKRGGEEIYVGPVGRHSTH
LIKYFEEIEGVSKIKDGYNPATWMLEVTSSSQEMALGVDFANIYKNSNLLRRNKALIAEL
STPAPGSKDIYFSTQYSTSFFTQCMACLWKQHWSYWRNPPYTAVRFLFTTFIGLMFGTMF
WDLGSKVGTAQDLSNAMGSMYAAVLFLGFQNGSAVQPVVAVERTVFYRERAAGMYSALPY
AFAQVLIEIPYVFVQSAVYGVIVYAMIGFEWTAAKFFWYLFFMYFTLLYFTFYGMMSVAV
TPNHHIAAIVSTAFYLIWNLFSGYIVPRPRIPIWWRWYYWACPVSWSLYGLVVSQYGDIQ
KNLTETETVKQYVKNYFGFDHDFVGVVAAAVLGWTVLFAFIFAFSIRAFNFQRR
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgctgatatttacagagctagtagtagtttaagagatagtttaagagcaggt
tcgtttgtatggagaaacagtactgtagaagcattttcaagatcttcacgagaagaagat
gatgaagaggctctaaaatgggctgcgctggagaaactacctacttatgatcgtttaagg
aaaggtatattgatgagtgcatcgagaggtgtgagtagtgaggtagatatcgaaaaactc
ggagtccaagagagaaaacagttgctggaaaggttggtcaaagctgcagacgaggataat
gagaagttcttgtggaaactcaagaatcgtattgaaagggttggaattgagtttccaaca
attgaagtgcggtacgagcatctaaatattggagctgaagcttatgtaggaagtggtgct
ttgccttcatttgctaagttcacttttagtataatagaggatctactcattgctcttcgt
ataattccaagtagaaagaaaccactcaccatccttaaggatgttagtggaatcatcaag
ccatcaagattgactctgctcttgggtcctccaagttctgggaagaccactcttctgttg
gcattggctggaaagcttgatcccagtcttaagtattctggtcgcgtgacatacaatggt
catgggatgaacgagttcgtaccacaaagaacggcttcctataccagtcaacaagatctc
catataggagaaatgaccgtgagggaaactttggccttctctgccagatgccaaggggtt
ggaaaccttcacgatatgttggcagagttgtcgagaagagagaaagaagccaacattaag
cctgatccagatattgatgtcttcttgaaggcagtagcaacacagggtcaagaggccaat
gtcatcaccgattacgtcttaaagatattaggattggaggtctgcgcagatactctggta
ggtgatgaaatgataaggggtatctctggaggacaaaggaagcgtgttacaactggtgaa
atgctggtcggaccatcaagggcattgtttatggatgagatttctacaggcctggacagc
tcaacaactcaccaaattgtgaactcattaaagcaaactattcacattctcaattacact
gccgtcatctcgcttctccagccagcaccggagacttatgacctcttcgatgacattatt
ctcctgtcagatggccaaattgtgtaccagggtcctcgtgaaaatgtgcttggatttttt
gaacatttgggcttccagtgtcctgaaagaaaaggcgtggcagattttctgcaagaagtg
acgtctaggaaagatcaagagaagtattgggcacgtaaagatcagccttacaggtttgtc
acagtcaacgaatttgctgaggcatttcaatcactcagcgtgggacgaagggtcatagag
gagctttcaatcccatttgacaagaccaagaaccatccagcggcattggtaaacaaaaag
tatggagctggaaagatggatctgcttaaagctaacttctcaagagaattcttgctcatg
aagaggaactcatttgtctacatcttcaagatattccaacttacaatgatggcaattatt
tcaatgacactcttcttccggaccaagatgcctcgagatacagtcgaggatggtggaatt
tatgctggtgctttgttcttcactgcgatcatgatcatgtttaatggtatggctgagctg
tctatgaccatcgcaaagcttcctgtgttctacaagcaaagggaactcctattctttcct
ccatggacatattcaattccgccttggatcctgaaaattcccattacatttgttgaagtt
gctgcatgggtgttcctaacttattatgtaatcggatttgatccaaacattggaaggttt
tttaagctgtacgcggtgcttgtgctaattaaccagatggcatctgcactatttcgattt
attgctgcagctggaaggaacatgattgttgccaacacattcgggtcatttgtgctcctc
gcagtttttgcgttgggtggcgtcatcttgtcaagagagcaaataaagaaatggtggata
tggggttactgggcttcaccattgatgtacgggcagaatgcaatagtagtgaatgagttc
cttggaaatagttggagtcatattcctgcaggctccacagaatcactaggaatccaagtt
ttgaagagtcgcgaattcttcacagaagcgtattggtactggataggaatcggggcaaca
gcaggattcatactactattcaatgtctgctttgttgtggccctcactgtcctcgatgca
tatgagaagcctcaggctgttatatctgaagaaccggaaagtggtgattctgaaggagct
gttcagttatcaaaccgtggaatcagtcaccaaaccaacacagattccattggtgaggcc
agcaacaacaggaagaaaggaatggttcttccatttgaaccacattccatcacatttgat
gatgttatttactccgttgacatgccacaggaaatgaaagttcaaggagtcgctgaggat
aggctggcgcttttgaagggtgtgagtggtgctttcaggcccggtatccttacagctttg
atgggtgttagtggtgctggaaaaacgactttgatggatgtgttagctggtaggaaaact
ggtggatatattgagggagacatcaagatttcagggtacccaaagaagcaagaaactttt
gctagaatttctggatactgtgagcaaaatgacattcactctccacaagttaccgtctat
gaatccttactctactcagcttggcttcgtctaccctcagaagttgactctgaaaccaga
aagatgttcattgaggaagtcatggatcttgtggagttgaatccgttgcgcagtgcatta
gttgggttgcctggtgtgaatggtttgtccactgagcaacgcaagcggctaaccattgca
gttgagctagttgcaaacccttctatcatattcatggatgagccaacttcagggctagat
gctagagccgctgccattgtgatgagaacagttaggaacactgttgacacaggaagaaca
gttgtttgcaccatccatcagcccagtatagatatatttgatgcttttgatgagttattc
ctgatgaagcgaggaggtgaagagatatatgttgggccagtgggtcgtcactctacccat
ctgattaagtactttgaggaaattgaaggagtgagtaaaattaaagatggctataatcca
gcaacttggatgctggaggttacttcatcatcacaagagatggctttgggggttgatttt
gctaacatttacaagaattcaaatctgctcaggagaaacaaagcacttattgcagaacta
agcacacctgctcctggctcgaaggacatttatttctctacgcagtactcgacatcattt
ttcacacaatgtatggcttgcttgtggaagcaacactggtcatactggaggaatccacca
tacactgccgtgagatttcttttcacaacctttatagggttgatgtttgggacaatgttc
tgggaccttggctccaaagtgggcactgcccaggatctttccaatgctatgggttcaatg
tatgcagctgttcttttccttggttttcaaaatggatcagctgtacagccagtggtggct
gttgaaagaactgtcttctacagagaaagagctgccggaatgtattcagctttgccctat
gcctttgcacaggtcttgattgagattccttatgtatttgttcaatccgctgtctatggt
gttatagtttatgcaatgattgggtttgaatggactgctgctaagttcttttggtatctg
ttctttatgtacttcacactattatacttcaccttctatggaatgatgtctgtggctgtg
actccaaaccaccacattgctgccatagtttccaccgcattttatttaatatggaacctc
ttctcggggtatatagtccctcgacctcggatacctatatggtggaggtggtactactgg
gcatgccccgtatcatggtccttgtatggattggttgtatcacagtatggagatatacag
aagaacctcaccgaaactgaaacagtgaaacaatatgtgaagaactatttcggattcgac
catgattttgttggagtggttgcagccgcggttcttggctggacagtcctctttgcgttc
atatttgccttttctatcagagccttcaacttccagaggcgatag
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integrated database retrieval system
