Populus trichocarpa (black cottonwood): 7460519
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Entry
7460519 CDS
T01077
Name
(RefSeq) chalcone synthase 1
KO
K00660
chalcone synthase [EC:
2.3.1.74
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00941
Flavonoid biosynthesis
pop00960
Tropane, piperidine and pyridine alkaloid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop04712
Circadian rhythm - plant
Module
pop_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00941 Flavonoid biosynthesis
7460519
00960 Tropane, piperidine and pyridine alkaloid biosynthesis
7460519
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
7460519
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
pop01008
]
7460519
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.74 chalcone synthase
7460519
Polyketide biosynthesis proteins [BR:
pop01008
]
Polyketide synthase (PKS)
Type III PKS
Plant type
7460519
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Gene cluster
GFIT
Motif
Pfam:
Chal_sti_synt_N
Chal_sti_synt_C
ACP_syn_III_C
FAE1_CUT1_RppA
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
7460519
NCBI-ProteinID:
XP_002299281
UniProt:
B9GMG1
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Position
1:complement(3880558..3882514)
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AA seq
391 aa
AA seq
DB search
MVTVDEIRKAQRAEGPATILAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMC
EKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQDMVVVEIPKLGKEAAAKAIKEWGQP
KSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAEN
NKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELV
SAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFW
IAHPGGPAILDQVEAKLELKPEKLRATRQVLADYGNMSSACVLFILDEMRKKSAKDGLKS
TGEGLEWGVLFGFGPGLTVETVVLHSLPATI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccgttgatgaaattcggaaggcgcagagggcagagggccctgccaccatcttg
gccattggaacatcaacccctccgaattgtgttgatcaaagcacctatcctgactattat
tttcgtatcaccaacagcgagcataaggtggagcttaaagaaaagttcaagcgaatgtgc
gagaaatccatgatcaagaagaggtacatgcacttgactgaggagatcttgaaagaaaat
cctagtgtgtgcgaatacatggcaccttcattggatgctaggcaggacatggtggtggtc
gagataccaaagttgggcaaagaagcagctgccaaggccatcaaggaatggggccagccc
aagtccaaaataacccatttggtcttttgcacaaccagtggtgttgacatgcccggggct
gactatcaactcactaagctcttgggtcttcgctcatcagtaaaacgtttcatgatgtac
cagcaaggttgttttgctggtgggacggtgctccgcctagctaaagaccttgctgaaaac
aacaaaggtgctcgcgtgctagtcgtgtgctcagaaataacagcagtgacatttcgtggc
cctagtgacacccacctcgatagtcttgtgggtcaagcgttgtttggtgacggcgcagct
gctatcataataggctcggatcctgtgctgggggtcgagaagcctttgtttgagctggtg
tctgccgcccagactattctacccgatagtgagggggctatagatggacatcttcgcgaa
gttgggcttacatttcaccttctcaaggatgtgcccgggcttatttcaaaaaacgtcgaa
aagagtctaaccgaggctttcaagcccttgggcatctcggattggaactcccttttctgg
attgcgcaccctggtgggcccgcaattctggaccaggtggaggctaagttggagcttaaa
cctgaaaaactgcgagccactcgacaagtactggctgactatggtaacatgtccagtgca
tgtgtgctatttattttggacgagatgaggaagaaatctgccaaggacgggcttaaatct
actggagaagggttggaatggggcgtccttttcgggttcgggcctgggcttactgttgag
acagtggtgctccacagtctgcctgccacaatttag
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