Populus trichocarpa (black cottonwood): 7460662 Help Entry 7460662           CDS       T01077                                  Name (RefSeq) nuclear-pore anchor isoform X1   KO K09291   nucleoprotein TPR Organism pop  Populus trichocarpa (black cottonwood) Pathway pop03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:pop00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     7460662  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pop03019]     7460662 Messenger RNA biogenesis [BR:pop03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      7460662 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_MLP1_2 Motif Other DBs NCBI-GeneID:  7460662 NCBI-ProteinID:  XP_024461894 LinkDB All DBs Position 8:complement(5027922..5050362) Genome browser AA seq 2086 aa AA seqDB search MHIFITDDDLARHSNDASYVAAKADEFIRGLQSELENVRAAADAASITAEQTCSLLEQKF LALSTEFSKLESQNAQLQSSLDDRLSELAQAQAQKHQLHLQSIGKDGEIERLTMEVSELH KSKRQLIELVEQKDLEISEKNATFNGYLDKIVNLTDRAANREARISELEAELARSQATCT RLLQEKELIERHNAWLNDELTAKVDTLMELRRRHADLEEDVSTKLADAERRFNESSSSSK RSMERVKELELKLTSVQEELCSSRDAAAANEERLSAELSTVNKLVELYKESSEEWSQKAG ELEGVIKALETHLSQVENDYKERLEKEISARKQLEKEAGDLKDKLERCEADIESSRKTNE LSLLPLNSYTTERWMDPLNNDDLADGNSMVVSKIPVGVSGTALAASLLRDGWSLAKMYAK YQEAVDALRHEQLGRKESEAVLQRVLCELEEKAGVILDERVEYERMVESYSVINQKLQHS FSEQANLEKTIQELKADLRRHERGYSFAQKEIVDLQKQVTVLLKECRDIQLRCGSSGHDQ VDNSKAIAPVGMGVESDPENAILERLTFKDINGLVEQNVQLRSLVRNLSDQIEDRETVFK EKIEMELKKHTDEAASKVAAVLQRAEEQGHMIESLHTSVAMYKRLYEEEHKLRSSYSRSS DAAPVEEDGRRNRLLLLEDSQEATKKAQEKAAERLRSLEEDLAKSKSDIILLRSERDKMA LDAKFARERLDSYMKEFEHQRNEMNGVLSRNVEFSQLIVDHQRKLRESSENLVASEELSR KLNMEVSVLKLEKEILSNAEKRACDEVRSLSERVYRLQATLDTIQSAEEAREEARAAEKR KQEEYVKKIEREWTEAKKELQQERDNVRALTSDREQTLKNAMRQIDDMGKELANTLHAVS AAETRAAVAETKLSELEKKMKVSDAKTASMNDSGISSSISATEVVTDLLMAKDEIQKLKE EARASKEHMLQYKSIAQVNETALKQMEDAHENFKKESEKLKESLENELLSLRGRISELDS EFSKKSEEVASAAVGKAEAFASALAEITCLKEENCSKTSQIVALESQISALKEDLEKEHE RWRAAQANYERQVILQSETIQELTKTSQALSLLQQEASDLRKLVDAQKSANDELKSKWEV EKSMIEESKNQAKKKYDELNEQNKLLHSRLEAIHIQLAEKDRNAAGISSGSNAPGLGSDA GLQNVVNYLRRSKEIAETEISLLKQEKLRLQSQLDGALKAAETAQASLHTERANSRTLLF SEEEIKSLQLQVRELTLLRESNMQLREENKHNFEECQKLREVAQNTKAQSDKLESLLRER QIEVEACKKEIEMDKVEKDHLEKRMSELLERCRNIDVEDYNRMKDDLRQMEEKLREKDAE MEGIKNLVSEQQEKILKLEQDLAKSESELNQRERRISDILQTEASLRSELEKQKKLSVQW KKKSEILSKEKEEFSKEKQALIKQIEDLKQGKRLLGNVTGEQVLKEKEEKEHRIQILEKT VERLREELKREREDLRTEKSKRQITEKAVLDSYKNVEQTKTKLEDKLELHKQVLKRISDE LEKLKHAEGNLPEGTSVVQLLSGTILDDLAATYVSAIENFERVALSVSSELGAGVQSVEN PLIPDASATVTPGQAVPSQATIVSPVAPHAHLPTKMAEEKERKVPVPKPNVETRKAGRKL VRPRLVRPEEPPSDVEMSEVDGSTSVAKLTPASESETQHNITLFSQPIARKRLASSSSDL NEQPLNQGETSSDVPPPVLKRPKGTDSVQEGSEGQAATPSETLVTLPAVEESAVADLSQG EEEAVAEKEEVETSGEKAEPPKESEQLDDTTQVEPENETNEVAEEILDKPSESGMEIYDG SKDHATAEDNQQLPVEFENEREEGELVAEVEEGADMSNMAGSPETGEVLPDTTPVASPAR IDDEAMVPVGMESGEINSPEMITDEKNDEGDIVEEIGEGSDKSNDGGDQIAVETDQSPEA ASVAGERTTATANTEMDASKQASSSGAEAEEVRQVSPASNTSTVVNLAERARQRAMLRQG GGGAPAVLSPPSGRGRGRVLRGRIARGARGGRGGRSGRGQTPGQQG NT seq 6261 nt NT seq  +upstreamnt  +downstreamnt atgcacatcttcatcaccgacgatgacctcgctcggcactcaaacgacgcgtcgtatgtg gccgcgaaggccgacgagttcatcagaggattgcagagcgaactcgaaaacgtgagggct gcggccgatgcggcgtcgatcaccgcggaacaaacctgttcgcttctcgaacagaagttc ttggctctttctaccgaattctcgaagctcgagtctcaaaacgcacagcttcagtcctct ctcgatgatcgcctctcagaacttgctcaggcacaggcacagaagcatcagcttcacttg caatctattggaaaggatggggagatagaaaggttgacgatggaggtttcggaattgcac aagtcgaagaggcagttgattgagttagtggagcagaaggatttggagattagtgagaag aatgctactttcaatggttatcttgacaagattgtcaatttgactgatagagcagcaaat agggaggctcgaataagcgaacttgaggcagagttggcccgttctcaggctacttgtact cgtcttttgcaggagaaagaacttattgagaggcataatgcatggctaaatgatgaattg actgccaaagttgacactctcatggagttacgccgaaggcatgctgatcttgaggaggat gtatctaccaagcttgcagatgcagagagacggttcaatgaaagctctagttcatcgaag aggagcatggaaagggtgaaggagttagaactgaaattgacatccgtgcaggaggaatta tgctcctctagagatgctgctgcagccaatgaagagcgattgtctgctgaactctcaact gtaaataagcttgttgaattgtacaaagaaagctctgaggaatggtctcaaaaggcagga gagctcgagggtgtgatcaaagctctagaaacacatttgagtcaagttgaaaatgactac aaagagagattggagaaggaaatatctgctcgaaaacaattagagaaggaggcgggggat ttgaaagacaaacttgaaaggtgcgaagctgatattgaaagtagcaggaaaactaatgaa ctgagtcttcttcctctcaacagttacactacagaaagatggatggatccgctcaataat gatgatcttgctgatggtaacagcatggttgtctccaagatcccagttggtgtttcagga actgcattagcagcttctctgctccgtgatggttggagtctggctaaaatgtatgcaaag taccaagaagcggttgatgctcttcgccatgagcaattgggaaggaaggaatcagaggca gtactgcaacgggttttgtgtgaactagaggagaaagcaggtgtaattttggatgaaaga gttgaatatgagagaatggtagaatcatactctgtcatcaaccaaaaattgcagcactca ttttctgaacaggcaaacctagagaaaacaatccaagaattaaaggcagatttgaggagg catgaacgtggttacagttttgctcaaaaggaaattgttgatcttcagaaacaggtgaca gttcttctaaaggaatgtcgtgatatacaacttcggtgtggatcttctgggcatgaccaa gttgataatagcaaagcaattgctcctgtcggaatgggcgtagagtctgatcctgaaaat gcaatcttggaacgccttaccttcaaggatataaatgggttagttgagcagaatgttcag ctcaggagccttgtgcgtaatctttcagatcagattgaagatagggagacggtgttcaag gagaaaattgaaatggaactcaaaaaacacactgatgaagctgcctccaaagttgctgct gtgttacaaagagctgaagagcagggtcacatgattgaatcactccacacttctgttgca atgtacaaaaggttgtatgaagaggaacacaagcttcgctcatcttattcccgctcttca gatgcagctccagttgaagaggatggaagaaggaaccgtttacttctgcttgaagattct caggaagctactaagaaggcccaggaaaaggctgctgagcgattaagatctcttgaggaa gatttggcgaaatctaagagtgatattatattactacgatcagaacgtgacaagatggct ctggatgctaaattcgctagagaaagacttgatagttatatgaaagaatttgaacatcag agaaatgaaatgaatggtgttttatcaagaaatgtggagttttcacagttgatagttgac catcaaagaaagttgcgtgaaagttcagaaaatttggttgcatctgaggaactttctcgg aagttaaatatggaggtgtctgttctaaagcttgaaaaggagattttgtcaaatgctgaa aagagagcatgtgatgaagttcgtagtttgtcggagagggtttatcgccttcaggctact ttggacactattcagagtgccgaggaggctcgtgaggaagcaagagctgctgagaagagg aaacaagaggagtatgtaaaaaaaattgagagggaatggactgaggccaagaaagagctg caacaggagcgggacaatgttagagctctcacatctgaccgtgaacagacgttgaagaat gccatgaggcaaattgatgacatggggaaggaattggctaatacgttgcatgctgtttct gctgctgaaactagggctgctgttgctgagaccaaactctccgagctggagaagaagatg aaagtttcggatgctaagactgccagtatgaatgacagtggcatatcttcttctatttcg gctactgaggttgttacggatttgcttatggcaaaggacgagatacaaaaattaaaagag gaagctcgggctagcaaggagcacatgctacagtataagagtatagcacaggtgaatgaa actgctctaaagcaaatggaagatgcccatgaaaacttcaagaaagagtcagagaagtta aaggaatcactagaaaatgaacttctttctctgcgggggaggatctcagaactcgacagc gaatttagtaagaagtctgaagaggtggcctctgcggctgtaggaaaagctgaggctttt gcttctgctttggcagaaattacctgtttgaaggaagaaaactgtagtaaaacctctcaa attgtagcgttggaatctcaaatttctgctttgaaagaggatttggaaaaggagcatgaa cgttggcgtgctgctcaagccaattatgaaagacaggttattctacaatctgagacaatt caggagttgacaaagacatcacaagctttatccttgctacaacaagaagcatctgacctt cgtaaattggtggatgcacagaaaagtgcaaatgacgagcttaagtctaagtgggaggta gagaaatcaatgattgaagaatcaaaaaatcaagcaaagaagaaatatgatgaactgaac gaacagaacaaattgctgcatagccggcttgaggctattcacattcaattggctgagaag gatcgaaatgctgctggaatttcttctggaagcaatgctccaggattaggcagcgatgct gggttgcagaatgtggttaactatcttcgaaggtcaaaggaaatagcagaaacagagatt tctttgctaaaacaggaaaagcttcgactgcaatcacaacttgatggtgctctgaaggct gcagaaactgcccaggcttcccttcatactgagcgtgcaaattcaaggacattattgttc tcagaggaagagataaaatcccttcaacttcaggttagagaattgaccttgcttcgtgaa agcaacatgcaattgagagaggaaaacaagcacaactttgaggaatgccagaaattgcgt gaagtagcacaaaatactaaagcacagtctgacaagctagaatctctattgagggagagg caaattgaggttgaagcttgtaagaaggaaattgaaatggacaaggtggagaaagatcac ttggaaaagagaatgtccgagctacttgagagatgtagaaatattgacgtggaagattac aataggatgaaggatgatcttagacagatggaggaaaaattgagagagaaggatgctgag atggagggaattaagaatcttgtatccgaacagcaggaaaaaatactgaaattggagcaa gaccttgccaagagtgaatcagaattgaaccaaagagagagaaggataagtgacattttg caaacagaggctagtctcagatctgagctggagaagcagaagaagctgtctgttcagtgg aagaaaaaatctgaaatcttatcaaaggagaaggaagaatttagcaaagaaaaacaagca ctcatcaaacagattgaggacttgaaacaaggtaaaagattgctgggaaatgttactggc gagcaggtcttgaaggaaaaggaggaaaaagaacacagaatacagattctggagaaaact gtcgagaggctaagagaggagttgaaaagggagagagaggatcttcggaccgagaaatca aagcgtcagattacagagaaggctgttttagattcctacaaaaatgttgagcagacgaag acaaagttggaggataaacttgagttgcataagcaggttctgaagcgcatatcagatgaa ctggaaaagcttaagcatgcagaaggcaatcttccagagggcacctctgtggttcagctt ctttctgggaccatcttggatgatctagctgccacctatgtatcagctatcgagaacttt gaaagggtagcactttctgtttcctctgaacttggagctggtgtccaatcagtggagaat cctttgattccagatgcttctgccactgttactcctggtcaggcagttccttctcaggct accatcgtttccccagtagctcctcatgctcacttacctactaaaatggccgaagagaag gagagaaaagttcctgtacccaaacccaatgttgaaactcgtaaggcagggaggaagctg gtaagaccccggcttgttagacctgaagagcctccaagcgatgttgagatgtcagaggtg gatggatctactagtgtggcaaagcttacacccgctagcgagtctgaaactcaacacaat atcacactattttctcagccaatagcccgcaagcgccttgcttcatctagttctgacttg aacgagcagccccttaatcaaggagagactagctctgatgttccaccacctgttttgaag aggccaaaaggtactgattccgtgcaagaaggtagtgaaggacaagctgccactccatca gagactctggtgacacttccggcggtggaagaatcagctgtcgctgatttgtctcaaggt gaagaggaagctgttgcagaaaaggaagaggttgagacttccggagagaaagcagaacct ccaaaagaatctgaacaattagatgacacaactcaagttgaaccagagaatgagacaaat gaagttgctgaagagattttggataaaccaagtgaaagtggaatggaaatttatgatggt tcaaaggatcatgctactgcagaagacaaccaacaattacctgtggagtttgaaaatgag agggaagagggggaactagttgcagaagtcgaggaaggcgctgatatgtcaaacatggca gggagcccggaaactggggaagttcttcctgacactactcctgtggcttcaccagctagg attgatgatgaagctatggttcctgtgggaatggagtcaggtgagattaattctcctgag atgatcactgatgagaagaatgacgagggtgatatagttgaagaaattggtgaaggttcc gacaagtcaaatgatggtggtgaccagatagctgtggagactgatcagagtcctgaggct gcttcagtcgctggagagagaacaacagctactgccaatacagaaatggatgcatcaaaa caagctagttccagtggagcagaggcagaagaggttagacaggtatcacctgcaagtaac acctctactgttgtgaatttagcagagcgagctaggcagagggcaatgctgagacagggt ggaggtggagctcctgcagtactttctcctccaagcggtagaggccgtggaagagttcta cgtggtcgaatagcacgtggtgcacgtggtgggcgtggtgggcgaagtggacgtggacaa actcccggtcaacagggttaa

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