Populus trichocarpa (black cottonwood): 7460696
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Entry
7460696 CDS
T01077
Name
(RefSeq) transcription factor CSA
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7460696
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
7460696
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Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF6581
Motif
Other DBs
NCBI-GeneID:
7460696
NCBI-ProteinID:
XP_002312252
UniProt:
B9HI82
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Position
8:complement(5483413..5485779)
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AA seq
448 aa
AA seq
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MARTLLHMQRQIITAEINGLACYYSTSPSSSTSSPCSSMGMIDRDIGSLCPKSGMTPPTS
SFHEMENGRFTWGFPFMGNYHANSDTAVEVRVSDSSDGFGENNETVNHEANSSNEENPDE
NMMSGKETESGQSKLCTRGHWRPAEDTQLKKLVALYGPQNWNLIAEKLEGRSGKSCRLRW
FNQLDPRINRKAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYR
EQSSAYRRRRLSQSVNRRTEETPSFVGRDAGMKTVQPPYCPSISSAGGLNKLSPCQIGNF
NGAGRGGVDYGLNGSPHMTSGGEAVSSIKVPQSGFCAQQTPFDFFSGPKSNDMMGMFSQT
ISWDRPNNEPRISGFYPQQHPSYILTMQQSNHQYPYCFSDSTASTLPQAVSASEPSCSSP
SVADQSRVSGHSETVPPPFIDFLGVGAT
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaccttgttacacatgcaacgccagataataacagcagaaattaatggtctt
gcttgttactactctacttccccctcatcttccacttcttctccttgttcttcaatggga
atgatcgatagagacattggttctctttgtcccaaatctggaatgacaccacctacctct
tcttttcatgaaatggaaaatgggaggtttacttggggatttcctttcatgggaaactat
catgctaacagtgatactgctgtggaggtcagggtttctgatagcagtgatgggttcgga
gagaacaatgagactgtaaatcacgaagctaactcatctaatgaagaaaacccagatgaa
aatatgatgagtggcaaggaaacagaaagtgggcagtcaaagctttgtacaagagggcat
tggaggccggcagaagatacccagctgaaaaaactcgtggctctttatggccctcaaaac
tggaaccttatagctgagaagttagaaggtagatcaggtaagagctgtagattaaggtgg
tttaaccagttggatccaaggataaacagaaaagctttcactgaagaagaagaagagaga
ctaatgcaagctcatagactttatggcaacaaatgggccatgatagcaagacttttccct
ggaaggactgataacgcagtcaagaaccactggcatgtcataatggcaagaaaatataga
gaacaatcaagtgcttacaggagaaggaggctaagtcaatctgtcaacagaagaacggag
gaaactccaagctttgtcggtagagatgcaggcatgaaaacagtacaaccaccatattgt
cccagcatctccagtgctggtggactaaacaagttatctccttgtcaaattggaaacttt
aatggtgctggtcgcggtggggttgactatggcttaaatggatcccctcacatgaccagt
gggggagaagcagtctcaagcattaaggttcctcaaagtgggttttgtgcacagcagaca
ccttttgatttcttctctggtcccaaaagtaatgacatgatgggcatgttcagccaaacc
atatcatgggataggccaaataatgaaccccgcatttctggtttctatccccaacaacac
ccttcatacattctgacaatgcaacagtcaaaccaccaatacccttattgcttctcagac
tccacagcgtcgacattacctcaagcagtttcagcaagtgagccttcatgttcatcccca
tcagtggcagatcagagcagagttagcggccattctgagaccgttccaccaccattcatc
gactttctcggggtaggagccacatga
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