Populus trichocarpa (black cottonwood): 7460710
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Entry
7460710 CDS
T01077
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7460710
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
7460710
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
7460710
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
7460710
NCBI-ProteinID:
XP_024463240
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All DBs
Position
8:complement(5657723..5662784)
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AA seq
493 aa
AA seq
DB search
MEVVRSESGVRSEKIAAPVAPVIARTKRLQVWFIRVCSSILLWTCLVQLLTVGELWHSSF
INIIAPSVKHPPLPLLPLRNYTSNGYLKVSCNGGLNQMRSAICDMVAVARLLNLTLVVPE
LDKTSFWADNSTFEDIFDVKHFIESLRDEIRIVRRLPKRFSSKYGYKVFEMPPVSWSSEE
YYLQQILPLFSKQKVLHFNKTDARLANNGVSIDLQKVRCRVTFQALKFTPEIESLGYKLV
RVLHERGPFVALHMRYEMDMLAFSGCTHGCTKEEAEELKQLRYAYPWWREKEIVSEERRS
QGLCPLTPEETALILQALGFDKDTQIYIAAGEIYGSERRLAVLRAAYPRTVRKEMLLDSG
ELQQFQNHSSQMAALDFMVSIASDTFIPTYDGNMAKVVEGHRRYLGFKKTVLLDRKRLVE
LMDLHQIGTLTWNEFVFAVRSAHEKRMGKPTRRRVIADKPKEEDYFYANPQECLCEGTSC
DDLLGPGNSSSVP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgttagatctgagagtggagtaaggagcgagaaaatagcagcgccggtggct
ccagtcattgctagaactaagcgattacaagtttggtttatcagggtttgttccagtatt
cttttatggacctgtttggttcagcttcttacggttggagagttatggcactccagtttt
atcaatatcatcgccccctccgttaaacatcctcctcttcccctccttccccttagaaac
tatacaagcaatggttatcttaaagtgtcctgcaatggtggcttgaatcaaatgcgatcc
gcgatctgtgacatggtggctgtcgccaggcttttgaatctcactttggttgttccagaa
cttgataaaacatctttctgggctgacaatagtacttttgaggacatatttgatgtgaaa
catttcattgagtcactaagagatgaaattcgaattgtcagaaggcttccaaagagattt
agtagtaaatatggatacaaagtatttgagatgcccccggttagctggtccagcgaagaa
tactacctgcaacagatcttgccacttttcagtaaacaaaaggtgttgcacttcaataaa
acagatgcacgtttggcaaacaacggggtttcaattgatcttcagaaagtcaggtgccgt
gttacttttcaggcactgaaattcactccagagattgaatctttggggtacaaattggtt
cgtgttctacacgaaagggggccttttgtggctttgcatatgagatatgagatggacatg
ttggctttctcaggttgtacccatggctgtaccaaggaagaagccgaggagctcaagcag
ttaaggtatgcatacccttggtggagagagaaagagatagtttctgaagagaggagatca
caaggtttgtgcccattgactcctgaggagacagcgttgattttgcaagcactgggtttt
gacaaggacacacagatatatattgcagctggtgagatatatggcagtgagcggagactt
gcggtgctaagagctgcttatccaaggactgtgagaaaggaaatgctattagattcaggg
gagctgcagcaattccagaaccattcatcacaaatggctgcactcgatttcatggtctca
atagccagtgacactttcatccccacctatgacggaaacatggcaaaagttgtggaaggt
caccgcaggtatcttgggtttaagaagactgtcctgctagaccgaaaaagacttgtggag
ttaatggatttgcatcagattgggacacttacatggaatgagtttgtatttgctgttcga
tcagcacatgagaagaggatgggaaagccaactcgacgtagggttattgcagataaacca
aaagaggaagattatttttacgcaaaccctcaagagtgcctttgtgagggaacaagctgt
gatgatttattaggacctggtaattcaagttcagttccgtga
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