Populus trichocarpa (black cottonwood): 7460737
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Entry
7460737 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7460737
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7460737
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7460737
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
Prok-RING_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
7460737
NCBI-ProteinID:
XP_024466108
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All DBs
Position
10:8124667..8129570
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AA seq
459 aa
AA seq
DB search
MGGKSSKESSWRDYSSYGSANSSSSSSSNQNGYPPASPYPYPSPQHNSYYTSQNHHAPAP
SSSSYPYESQRTPQHPQKRLDRKYSRIADNYKTLDQVTAALAQAGLESSNLIVGIDFTKS
NEWTGARSFNRRSLHHIGNGQNPYEQAISIIGRTLSAFDEDNLIPCYGFGDASTHDQDVF
SFFPDERFCNGFEEVLMQYKEIVPNLRLAGPTSFAPVIEMAITIVEQSGGQYHVLLIIAD
GQVTRSVDTQSGQLSPQERRTIDAIVRASKYPLSIILVGVGDGPWDMMREFDDNIPARAF
DNFQFVNFTEIMSKNVSESRKETEFALASLMEIPSQHQATIELGLLGHHSGNAPERVPLP
PPLYGPHSSSRSNASRSSSFQRRVPSYSGYDTPVSGYETASGKAPSPSSVYDNQVCVICL
TNPKDMAFGCGHQTCCDCGEDLQLCPICRRPIQTRIRLY
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtaaaagctcaaaagagtccagttggagagattattcttcttatggttcagcc
aattcttcttcttcttcttcatcgaatcagaatggttatcctccagcatcaccatatcca
tatccatctcctcaacataattcctactacacatctcagaatcaccatgcgcctgctcct
agttcatcatcttatccttatgaatcacaaagaaccccccaacatccacagaagaggttg
gataggaaatactcgagaatagctgacaattacaagaccctggatcaggtgactgctgct
cttgctcaagctgggttagagtcttctaatctcattgttggaattgacttcacaaaaagc
aacgagtggacaggtgcaagatcattcaatcggcgaagcttacatcatattggaaatggt
caaaatccatatgaacaagcaatatcaattattgggaggactttatctgcatttgatgag
gataacttaattccatgttatggattcggagatgcatcaactcatgatcaggatgttttc
agtttctttccggatgagagattctgtaatggattcgaggaggtgctgatgcaatacaaa
gaaattgttcccaaccttcggctcgcaggaccgacatcttttgcacctgttattgagatg
gccataactattgttgagcaaagtggtgggcagtaccatgttttactgataattgctgat
ggacaggtgacgagaagtgttgacacgcagtctggccagctcagtccacaagagagaagg
acaattgatgcaattgtcagagcaagcaaataccctctatcgatcatcttagttggagtt
ggtgatggaccttgggacatgatgagggagttcgatgataacatccctgctcgagccttc
gacaatttccagtttgtgaattttacagaaataatgtccaaaaatgtgagtgaatcaaga
aaagaaacagaatttgctcttgcatcattgatggaaataccttctcaacatcaagcaact
attgagcttggcttattaggtcaccatagtgggaatgcgccagagagggttcctttgccc
ccaccactttacggcccgcattcttcaagcagatcaaatgcttcccgctcaagcagcttc
cagcggcgggtaccttcttattctggatatgatacaccagttagtggatacgaaacagca
tcagggaaggctccatctcctagctctgtgtacgataatcaggtttgcgtcatttgtctt
accaatccaaaggacatggccttcggctgcgggcaccagacttgttgtgactgtggagaa
gacctccaactgtgccctatttgtcgacgcccaatacagaccagaatcaggctctattaa
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