Populus trichocarpa (black cottonwood): 7460778
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Entry
7460778 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase BOI isoform X1
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7460778
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7460778
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7460778
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
IFT74
Prok-RING_4
CHP04376
Hmw_CFAP97
COG7_C
DUF4618
DUF7833
CENP-F_N
V-SNARE
Phage_TAC_4
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
7460778
NCBI-ProteinID:
XP_024466392
LinkDB
All DBs
Position
10:complement(7364574..7369170)
Genome browser
AA seq
339 aa
AA seq
DB search
MLGGNNGNSLLPVFMDENHIPYQTNASNQLQLFGNLAAGCSIDPVNYFGNEHGTPILRAN
KRGREAEDFGRQQKLQISLNYNICQDEADRSASIPNPNPVSTGLRLSYDDDEHNSSITSA
SGSMSAAPSIILSLGDNIRTELDRQNDEFDQYIKIQEEHLAKGVRDLKQRHFSSLLAAME
KGVSKKLQEKDREIENINRKNKELIERIRQVAAEAQNWHYRAKYNESVVNVLKSNLQQAI
SQGADQGKEGFGDNEIDDAASYIEPNNYLNFSGDPAKPLPWNYQGLKEHVTCRACKTREV
SMLLMPCRHLCLCKECDALINVCPVCRLIKTNSFQVFLS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgttggggggtaacaatggcaattctttgcttcctgttttcatggatgagaatcatatt
ccttatcagactaacgcatcaaaccagttgcaattgtttggtaatttggcagctggatgc
agcattgacccagtgaattattttggaaatgaacatggaactcctatcctccgtgccaat
aaacgtggaagggaagcagaagattttggcagacagcaaaagctacagatttccttaaat
tataacatttgtcaagatgaagctgaccgctcagcaagcattccaaacccaaaccctgtt
tcaactgggttgcgtctatcttatgatgatgatgaacacaactcatccataacttctgca
agtggaagtatgagtgctgcaccttcaatcatcctgtcccttggtgacaatattaggact
gagcttgatcggcagaacgatgagtttgatcagtatatcaagattcaggaggagcactta
gctaagggggtgagggacttgaagcagagacatttttcttctttgcttgctgccatggag
aagggtgtaagcaagaagctacaggaaaaagacagagaaatagagaacataaaccgtaaa
aacaaggagttgattgagagaataaggcaggtggctgctgaagcccagaactggcactat
agagcaaagtacaatgaatcagttgtcaatgtcctgaagagcaacctccagcaggcaatt
tcacagggcgctgatcaagggaaggaaggattcggagacaatgagattgatgatgctgcc
tcttacattgaacctaacaactacctgaacttttcaggtgatcctgcaaagcctctcccc
tggaactatcaaggcttgaaggaacatgtgacatgtcgagcatgcaaaacaagggaagtg
tccatgttgttaatgccctgcaggcatctctgcttgtgtaaagaatgtgatgcgttaatc
aatgtttgtcctgtatgccggttgatcaaaactaatagttttcaagtgttcttgtcctaa
DBGET
integrated database retrieval system
